Liquid Chromatography-Tandem Mass Spectrometry Method Revealed that Lung Cancer Cells Exhibited Distinct Metabolite Profiles upon the Treatment with Different Pyruvate Dehydrogenase Kinase Inhibitors

J Proteome Res. 2018 Sep 7;17(9):3012-3021. doi: 10.1021/acs.jproteome.8b00184. Epub 2018 Jul 31.

Abstract

Pyruvate dehydrogenase kinases (PDKs) dominate the critical switch between mitochondria-based respiration and cytoplasm-based glycolysis by controlling pyruvate dehydrogenase (PDH) activity. Up-regulated PDKs play a great role in the Warburg effect in cancer cells and accordingly present a therapeutic target. Dichloroacetate (DCA) and AZD7545 are the two most-well-known PDK inhibitors exhibiting distinct pharmacological profiles. DCA showed anticancer effects in various preclinical models and clinical studies, while the primary preclinical indication of AZD7545 was on the improvement of glucose control in type II diabetes. Little, if any, study has been undertaken the elucidation of the effects of PDK inhibition on the metabolites in the tricarboxylic acid (TCA) cycle. Herein, the metabolite alterations of lung cancer cells (A549) upon the treatment with PDK inhibitors were studied using a reliable liquid-chromatography-based tandem mass spectrometry method. The developed method was validated for quantification of all common glycolysis and TCA cycle catabolites with good sensitivity and reproducibility, including glucose, pyruvate, lactate, acetyl coenzyme A, citrate, α-ketoglutarate, fumarate, succinate, malate, and oxaloacetate. Our results suggested that A549 cells exhibited distinct metabolite profiles following the treatment with DCA or AZD7545, which may reflect the different pharmacological indications of these two drugs.

Keywords: AZD7545; LC−MS/MS; aerobic glycolysis; cancer metabolism; dichloroacetate; pyruvate dehydrogenase kinases.

Publication types

  • Research Support, Non-U.S. Gov't
  • Validation Study

MeSH terms

  • A549 Cells
  • Acetyl Coenzyme A / metabolism
  • Anilides / chemistry
  • Anilides / pharmacology*
  • Antineoplastic Agents / chemistry
  • Antineoplastic Agents / pharmacology
  • Chromatography, Liquid
  • Citric Acid Cycle / drug effects*
  • Citric Acid Cycle / genetics
  • Cytosol / drug effects
  • Cytosol / enzymology
  • Dichloroacetic Acid / chemistry
  • Dichloroacetic Acid / pharmacology*
  • Gene Expression Regulation
  • Glucose / metabolism
  • Glycolysis / drug effects*
  • Glycolysis / genetics
  • Humans
  • Isoenzymes / antagonists & inhibitors
  • Isoenzymes / genetics
  • Isoenzymes / metabolism
  • Lactic Acid / metabolism
  • Mitochondria / drug effects
  • Mitochondria / enzymology
  • Oxidative Phosphorylation / drug effects*
  • Protein Kinase Inhibitors / chemistry
  • Protein Kinase Inhibitors / pharmacology*
  • Protein Serine-Threonine Kinases / antagonists & inhibitors*
  • Protein Serine-Threonine Kinases / genetics
  • Protein Serine-Threonine Kinases / metabolism
  • Pyruvate Dehydrogenase Acetyl-Transferring Kinase
  • Pyruvic Acid / metabolism
  • Tandem Mass Spectrometry

Substances

  • AZD 7545
  • Anilides
  • Antineoplastic Agents
  • Isoenzymes
  • Protein Kinase Inhibitors
  • Pyruvate Dehydrogenase Acetyl-Transferring Kinase
  • Lactic Acid
  • Acetyl Coenzyme A
  • Pyruvic Acid
  • Dichloroacetic Acid
  • Protein Serine-Threonine Kinases
  • Glucose