Mixing rates in weakly differentiated stocks of greater amberjack (Seriola dumerili) in the Gulf of Mexico

Genetica. 2018 Oct;146(4-5):393-402. doi: 10.1007/s10709-018-0031-1. Epub 2018 Jul 25.

Abstract

The greater amberjack (Seriola dumerili) is a commercially and recreationally important marine fish species in the southeastern United States, where it has been historically managed as two non-mixing stocks (Gulf of Mexico and Atlantic). Mark-recapture studies and analysis of mitochondrial DNA have suggested the two stocks are demographically independent; however, little is currently known about when and where spawning occurs in Gulf of Mexico amberjack, and whether stock mixture occurs on breeding grounds. The primary objective of this study was to quantify stock mixture among breeding populations of amberjack collected from the Atlantic and Gulf of Mexico. Genetic data based on 11 loci identified very low, though statistically significant differentiation among Gulf of Mexico samples (GST = 0.007, [Formula: see text] = 0.009; all P = 0.001) and between reproductive adults collected from two spawning areas (GST = 0.007, [Formula: see text] = 0.014; all P = 0.001). Naïve Bayesian mixture analysis supported a single genetic cluster [p(S|data) = 0.734] whereas trained clustering (using Atlantic and Gulf spawning fish) gave the highest support to a two-cluster model (p(S|data) = 1.0). Our results support the argument that the genetic structuring of greater amberjack is more complex than the previously assumed two, non-mixing stock model. Although our data provide evidence of limited population structure, we argue in favour of non-panmixia among reproductive fish collected from the Gulf of Mexico and Florida Keys.

Keywords: Admixture; Carangidae; Greater amberjack; Gulf of Mexico; Microsatellite; Stock mixing; Western Atlantic Ocean.

MeSH terms

  • Animal Population Groups / genetics
  • Animals
  • Atlantic Ocean
  • Bayes Theorem
  • Breeding
  • Cluster Analysis
  • DNA, Mitochondrial / genetics
  • Demography / methods*
  • Genetic Variation / genetics
  • Genetics, Population / methods
  • Gulf of Mexico
  • Microsatellite Repeats / genetics
  • Perciformes / genetics*
  • Phylogeography / methods
  • Quantitative Trait Loci / genetics
  • Reproduction / genetics*

Substances

  • DNA, Mitochondrial