Identification of plasma biomarkers for diffuse axonal injury in rats by iTRAQ-coupled LC-MS/MS and bioinformatics analysis

Brain Res Bull. 2018 Sep:142:224-232. doi: 10.1016/j.brainresbull.2018.07.015. Epub 2018 Aug 2.

Abstract

DAI is a serious and complex brain injury associated with significant morbidity and mortality. The lack of reliable objective diagnostic modalities for DAI delays administration of therapeutic interventions. Hence, identifying reliable biomarkers is urgently needed to enable early DAI diagnosis in the clinic. Herein, we established a rat model of DAI and applied an isobaric tags for a relative and absolute quantification (iTRAQ) coupled with nano-liquid chromatography-tandem mass spectrometry (nano-LC-MS/MS) proteomics approach to screen differentially expressed plasma proteins associated with DAI. A total of 58 proteins were found to be significantly modulated in blood plasma samples of the injury group in at least one time point compared to controls. Bioinformatics analysis of the differentially expressed proteins revealed that the pathogenesis of axonal injury underlying DAI is multi-stage biological process involved. Two significantly changed proteins, glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and hemopexin (Hpx), were identified as potential diagnostic biomarkers for DAI, and were successfully confirmed by further western blot analysis. This proteomic profiling study not only identified novel plasma biomarkers that may facilitate the development of clinically diagnostic for DAI, but also provided enhanced understanding of the molecular mechanisms underlying DAI.

Keywords: Biomarkers; Diffuse axonal injury; Proteomics; Rats; iTRAQ.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biomarkers / blood
  • Brain / pathology
  • Chromatography, Liquid
  • Diffuse Axonal Injury / blood*
  • Diffuse Axonal Injury / pathology
  • Disease Models, Animal
  • Male
  • Proteome
  • Proteomics / methods
  • Random Allocation
  • Rats, Sprague-Dawley
  • Tandem Mass Spectrometry

Substances

  • Biomarkers
  • Proteome