Association of vitamin D receptor gene FokI polymorphism and susceptibility to CAP in Egyptian children: a multicenter study

Pediatr Res. 2018 Nov;84(5):639-644. doi: 10.1038/s41390-018-0149-y. Epub 2018 Aug 15.

Abstract

Background: Community-acquired pneumonia (CAP) is the leading cause of child deaths around the world. Recently, the vitamin D receptor (VDR) gene has emerged as a susceptibility gene for CAP.

Objectives: To evaluate the association of the VDR gene Fok I polymorphism with susceptibility to CAP in Egyptian children.

Methods: This was a multicenter case-control study of 300 patients diagnosed with CAP, and 300 well-matched healthy control children. The VDR Fok I (rs2228570) polymorphism was genotyped by PCR-restriction fragment length polymorphism (RFLP), meanwhile serum 25-hydroxy vitamin D (25D) level was assessed using ELISA method.

Results: The frequencies of the VDR FF genotype and F allele were more common in patients with CAP than in our control group (OR = 3.6; (95% CI: 1.9-6.7) for the FF genotype; P = 0.001) and (OR: 1.8; (95% CI: 1.4-2.3) for the F allele; P = 0.01). Patients carrying the VDR FF genotype had lower serum (25D) level (mean; 14.8 ± 3.6 ng/ml) than Ff genotype (20.6 ± 4.5 ng/ml) and the ff genotype (24.5 ± 3.7 ng/ml); P < 0.01.

Conclusion: The VDR gene Fok I (rs2228570) polymorphism confers susceptibility to CAP in Egyptian children.

Publication types

  • Multicenter Study

MeSH terms

  • Case-Control Studies
  • Child
  • Child, Preschool
  • Community-Acquired Infections / blood
  • Community-Acquired Infections / genetics*
  • Deoxyribonucleases, Type II Site-Specific / metabolism*
  • Egypt
  • Female
  • Genetic Predisposition to Disease*
  • Humans
  • Infant
  • Male
  • Pneumonia / blood
  • Pneumonia / genetics*
  • Polymorphism, Genetic*
  • Prospective Studies
  • Receptors, Calcitriol / genetics*
  • Vitamin D / analogs & derivatives
  • Vitamin D / blood

Substances

  • Receptors, Calcitriol
  • VDR protein, human
  • Vitamin D
  • 25-hydroxyvitamin D
  • endodeoxyribonuclease FokI
  • Deoxyribonucleases, Type II Site-Specific