Efficient single-copy HDR by 5' modified long dsDNA donors

Elife. 2018 Aug 29:7:e39468. doi: 10.7554/eLife.39468.

Abstract

CRISPR/Cas9 efficiently induces targeted mutations via non-homologous-end-joining but for genome editing, precise, homology-directed repair (HDR) of endogenous DNA stretches is a prerequisite. To favor HDR, many approaches interfere with the repair machinery or manipulate Cas9 itself. Using Medaka we show that the modification of 5' ends of long dsDNA donors strongly enhances HDR, favors efficient single-copy integration by retaining a monomeric donor conformation thus facilitating successful gene replacement or tagging.

Keywords: developmental biology; endogenous gene tagging; genetics; genomics; homologous recombination; oryzias latipes; precision genome editing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • CRISPR-Cas Systems*
  • DNA / genetics*
  • DNA / metabolism
  • DNA End-Joining Repair*
  • Embryo, Nonmammalian / metabolism
  • Fish Proteins / genetics
  • Fish Proteins / metabolism
  • Gene Editing / methods*
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Models, Genetic
  • Oryzias
  • Recombinational DNA Repair*

Substances

  • Fish Proteins
  • Green Fluorescent Proteins
  • DNA