The presence of repeated DNA sequences and a partial restriction map of the pSym of Rhizobium fredii USDA193

Plasmid. 1986 Jul;16(1):37-44. doi: 10.1016/0147-619x(86)90077-6.

Abstract

The large, 350-kb Sym (symbiotic) plasmid pRjaUSDA193 of Rhizobium fredii was examined to determine the frequency of repeated sequences present and to produce a physical and genetic map of a large region of the plasmid. A novel hybridization method, the Southern Cross, revealed that the plasmid pRjaUSDA193 contained many repeated sequences and assisted in restriction enzyme mapping of a 100-kb region containing nod genes. A cosmid clone bank was prepared with the broad-host-range cosmid pVK102. The restriction enzymes HindIII, HpaI, and KpnI were used to construct a physical map of overlapping clones. Labeled nod gene sequences were used to determine their location in the mapped region.

MeSH terms

  • Chromosome Mapping
  • Cloning, Molecular
  • DNA Restriction Enzymes
  • Genes, Bacterial
  • Nucleic Acid Hybridization
  • Plasmids*
  • Repetitive Sequences, Nucleic Acid*
  • Rhizobium / genetics*

Substances

  • DNA Restriction Enzymes