Identification of trophoblast-specific elements in the HLA-C core promoter

HLA. 2018 Nov;92(5):288-297. doi: 10.1111/tan.13404. Epub 2018 Oct 30.

Abstract

There are several aspects of HLA-C gene expression that distinguish it from the HLA-A and HLA-B genes. First, HLA-C is expressed by extravillous trophoblasts, whereas HLA-A and HLA-B are not. Second, its cell-surface expression is much lower, which has been linked to changes in transcription and efficiency of peptide loading and export. Third, HLA-C possesses a NK cell-specific promoter and a complex alternative splicing system that regulates expression during NK cell development. In this study, we investigate the contribution of the HLA-C core promoter to trophoblast-specific expression. Analysis of transcription start sites showed the presence of a trophoblast-associated start site and additional upstream TATA and CCAAT-box elements in the HLA-C promoter, suggesting the presence of an overlapping trophoblast-specific promoter. A comparison of in vitro promoter activity showed that the HLA-C promoter was more active in trophoblast cell lines than either the HLA-A or HLA-B promoters. Enhanced trophoblast activity was mapped to the central enhanceosome region of the promoter, and mutational analysis identified changes in the RFX-binding region that generated a trophoblast-specific enhancer.

Keywords: HLA; HLA-C; MHC class I; extravillous trophoblasts; major histocompatibility complex; promoter; transcription factors.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural

MeSH terms

  • Cells, Cultured
  • Choriocarcinoma / genetics*
  • Choriocarcinoma / pathology
  • Female
  • HLA-A Antigens / genetics
  • HLA-B Antigens / genetics
  • HLA-C Antigens / genetics*
  • Humans
  • Promoter Regions, Genetic*
  • Regulatory Elements, Transcriptional*
  • Trophoblasts / cytology
  • Trophoblasts / metabolism*
  • Uterine Neoplasms / genetics*
  • Uterine Neoplasms / pathology

Substances

  • HLA-A Antigens
  • HLA-B Antigens
  • HLA-C Antigens