Role of DNA topoisomerase I in the transcription of supercoiled rRNA gene

Proc Natl Acad Sci U S A. 1987 May;84(10):3185-8. doi: 10.1073/pnas.84.10.3185.

Abstract

The fraction DE-B obtained by fractionating an extract from rat mammary adenocarcinoma cells on a DEAE-Sephadex column was used for transcribing linear and supercoiled rRNA gene (rDNA). This fraction, which is known to contain RNA polymerase I and essential transcription factors, also contains DNA topoisomerase I activity. Inhibition of this topoisomerase activity by the selective inhibitor camptothecin markedly diminished transcription of supercoiled rDNA, and at a concentration of 150 microM, camptothecin almost completely inhibited DNA topoisomerase I activity and supercoiled rDNA transcription. Addition of exogenous calf thymus DNA topoisomerase I to the sample containing the drug restored the ability of the extract to transcribe supercoiled rDNA. Camptothecin, even at a concentration of 500 microM, had no significant effect on the transcription of linear rDNA. These studies show that relaxation of supercoiled rDNA by DNA topoisomerase I is essential for its transcription. The preferential inhibition of rRNA synthesis in vivo following treatment with camptothecin is probably due to selective camptothecin inhibition of DNA topoisomerase I activity.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adenocarcinoma / genetics
  • Animals
  • Camptothecin / pharmacology
  • DNA Topoisomerases, Type I / metabolism*
  • DNA, Superhelical / genetics*
  • Genes*
  • Mammary Neoplasms, Experimental / genetics
  • RNA Polymerase I / metabolism
  • RNA, Ribosomal / genetics*
  • Rats
  • Transcription Factors / metabolism
  • Transcription, Genetic* / drug effects

Substances

  • DNA, Superhelical
  • RNA, Ribosomal
  • Transcription Factors
  • RNA Polymerase I
  • DNA Topoisomerases, Type I
  • Camptothecin