Distinct gene expression signatures induced by viral transactivators of different HTLV-1 subgroups that confer a different risk of HAM/TSP

Retrovirology. 2018 Nov 6;15(1):72. doi: 10.1186/s12977-018-0454-x.

Abstract

Background: Among human T cell leukemia virus type 1 (HTLV-1)-infected individuals, there is an association between HTLV-1 tax subgroups (subgroup-A or subgroup-B) and the risk of HAM/TSP in the Japanese population. To investigate the role of HTLV-1 subgroups in viral pathogenesis, we studied the functional difference in the subgroup-specific viral transcriptional regulators Tax and HBZ using microarray analysis, reporter gene assays, and evaluation of viral-host protein-protein interaction.

Results: (1) Transcriptional changes in Jurkat Tet-On human T-cells that express each subgroup of Tax or HBZ protein under the control of an inducible promoter revealed different target gene profiles; (2) the number of differentially regulated genes induced by HBZ was 2-3 times higher than that induced by Tax; (3) Tax and HBZ induced the expression of different classes of non-coding RNAs (ncRNAs); (4) the chemokine CXCL10, which has been proposed as a prognostic biomarker for HAM/TSP, was more efficiently induced by subgroup-A Tax (Tax-A) than subgroup-B Tax (Tax-B), in vitro as well as in unmanipulated (ex vivo) PBMCs obtained from HAM/TSP patients; (5) reporter gene assays indicated that although transient Tax expression in an HTLV-1-negative human T-cell line activated the CXCL10 gene promoter through the NF-κB pathway, there was no difference in the ability of each subgroup of Tax to activate the CXCL10 promoter; however, (6) chromatin immunoprecipitation assays showed that the ternary complex containing Tax-A is more efficiently recruited onto the promoter region of CXCL10, which contains two NF-κB binding sites, than that containing Tax-B.

Conclusions: Our results indicate that different HTLV-1 subgroups are characterized by different patterns of host gene expression. Differential expression of pathogenesis-related genes by subgroup-specific Tax or HBZ may be associated with the onset of HAM/TSP.

Keywords: HAM/TSP; HBZ; HTLV-1; Microarray; Tax; Virus subgroup.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Basic-Leucine Zipper Transcription Factors / genetics
  • Cell Line
  • Female
  • Gene Products, tax / genetics*
  • HTLV-I Infections / genetics*
  • Human T-lymphotropic virus 1 / classification
  • Human T-lymphotropic virus 1 / genetics*
  • Human T-lymphotropic virus 1 / pathogenicity*
  • Humans
  • Jurkat Cells
  • Male
  • Microarray Analysis
  • Middle Aged
  • Paraparesis, Tropical Spastic / genetics*
  • Paraparesis, Tropical Spastic / virology
  • RNA, Untranslated / genetics
  • Retroviridae Proteins / genetics
  • Risk Factors
  • Trans-Activators / genetics*
  • Transcriptome
  • Viral Proteins / genetics

Substances

  • Basic-Leucine Zipper Transcription Factors
  • Gene Products, tax
  • HBZ protein, human T-cell leukemia virus type I
  • RNA, Untranslated
  • Retroviridae Proteins
  • Trans-Activators
  • Viral Proteins