Epigenomic regulation of heart failure: integrating histone marks, long noncoding RNAs, and chromatin architecture

F1000Res. 2018 Oct 29:7:F1000 Faculty Rev-1713. doi: 10.12688/f1000research.15797.1. eCollection 2018.

Abstract

Epigenetic processes are known to have powerful roles in organ development across biology. It has recently been found that some of the chromatin modulatory machinery essential for proper development plays a previously unappreciated role in the pathogenesis of cardiac disease in adults. Investigations using genetic and pharmacologic gain- and loss-of-function approaches have interrogated the function of distinct epigenetic regulators, while the increased deployment of the suite of next-generation sequencing technologies have fundamentally altered our understanding of the genomic targets of these chromatin modifiers. Here, we review recent developments in basic and translational research that have provided tantalizing clues that may be used to unlock the therapeutic potential of the epigenome in heart failure. Additionally, we provide a hypothesis to explain how signal-induced crosstalk between histone tail modifications and long non-coding RNAs triggers chromatin architectural remodeling and culminates in cardiac hypertrophy and fibrosis.

Keywords: cardiac hypertrophy; epigenetics; fibrosis; heart failure.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Cardiomegaly / genetics
  • Chromatin Assembly and Disassembly
  • Epigenesis, Genetic / genetics*
  • Epigenesis, Genetic / physiology
  • Epigenomics / methods
  • Fibrosis / genetics
  • Heart Failure / etiology
  • Heart Failure / genetics*
  • Histone Code
  • Humans
  • RNA, Long Noncoding
  • Receptor Cross-Talk

Substances

  • RNA, Long Noncoding

Grants and funding

T.A.M. was supported by the National Institutes of Health (HL116848 and HL127240) and the American Heart Association (16SFRN31400013). Research in the Vondriska and Wang laboratories is supported by grants from the National Heart, Lung, and Blood Institute, the American Heart Association, and the David Geffen School of Medicine at UCLA.