Quantitative Proteomics Reveals Antibiotics Resistance Function of Outer Membrane Proteins in Aeromonas hydrophila

Front Cell Infect Microbiol. 2018 Nov 6:8:390. doi: 10.3389/fcimb.2018.00390. eCollection 2018.

Abstract

Outer membrane proteins (OMPs) play essential roles in antibiotic resistance, particularly in Gram-negative bacteria; however, they still have many unidentified functions regarding their behavior in response to antibiotic stress. In the current work, quantitative tandem mass tag labeling-based mass spectrometry was used to compare the outer membrane related proteins between an oxytetracycline-resistant (OXY-R) and its original control stain (OXY-O) in Aeromonas hydrophila. Consequently, a total of 261 commonly altered proteins in two biological repeats were identified including 29 proteins that increased and 28 that decreased. Gene ontology analysis showed that the expression of transport proteins was significantly reduced, and translation-related proteins were downregulated in the OXY-R strain. After using western blotting to validate selected altered proteins, eight OMP-related genes were knocked out and their roles in antibiotic resistance were further evaluated. The survival assays showed that some mutants such as ΔAHA_4281, ΔAHA_2766, ΔAHA_2282, ΔAHA_1181, and ΔAHA_1280 affected the susceptibility of A. hydrophila to antimicrobials. Moreover, the minimum inhibitory concentration assay showed that these candidate mutants also respond differently to other types of antibiotics. Our results reveal several novel outer membrane related proteins of A. hydrophila that play important roles in antibiotic resistance, and as such, may be helpful for screening studies to identify novel drug targets.

Keywords: Aeromonas hydrophila; outer membrane protein; oxytetracycline resistance; quantitative proteomics; sarcosine-insoluble proteins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aeromonas hydrophila / drug effects
  • Aeromonas hydrophila / genetics
  • Aeromonas hydrophila / metabolism*
  • Bacterial Outer Membrane Proteins / drug effects
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Outer Membrane Proteins / metabolism*
  • Bacterial Proteins / genetics
  • Blotting, Western
  • Down-Regulation
  • Drug Resistance, Microbial / drug effects
  • Drug Resistance, Microbial / genetics
  • Drug Resistance, Microbial / physiology*
  • Gene Knockout Techniques
  • Metabolic Networks and Pathways
  • Microbial Sensitivity Tests
  • Oxytetracycline / pharmacology
  • Proteomics / methods*
  • Recombinant Proteins
  • Tandem Mass Spectrometry

Substances

  • Bacterial Outer Membrane Proteins
  • Bacterial Proteins
  • Recombinant Proteins
  • Oxytetracycline