Relative Human Telomere Length Quantification by Real-Time PCR

Methods Mol Biol. 2019:1896:39-44. doi: 10.1007/978-1-4939-8931-7_5.

Abstract

Telomere measurement by quantitative PCR amplification is a well-known simple method to detect telomere length that involves large numbers of samples. The method has been developed by Cawthon in 2002 (Cawthon, Nucleic Acids Res 30:47e-47, 2002) and remains the most frequently used technique either in original or modified version. Telomere length is estimated by comparing the amount of telomere repeat amplification product (T) to a single copy gene (S) product. The T/S ratio correlates with the average telomere length. Cawthon suggested and recommended the use of 36B4 (RPLP0) as a single copy gene. However, Cawthon's suggestion was no longer considered a single copy gene and the gene was not suitable and appropriate for normalization.We thereby introduced a simple method for relative measurement of average human telomere length using quantitative real-time PCR. Our protocol was based on Cawthon's initial technique (Cawthon, Nucleic Acids Res 30:47e-47, 2002), modified by single-copy gene (SCG) primers and optimized.This technique is rapid, low cost, not demanding on DNA amount (or live cells), and can be used for a high-throughput screening and time monitoring.

Keywords: 36B4; IFNB1; Primers; Quantitative PCR; Real-time PCR; Single-copy gene; Telomere; Telomere length; Telomere measurement.

MeSH terms

  • DNA Primers
  • Humans
  • Interferon-beta / genetics*
  • Real-Time Polymerase Chain Reaction / methods*
  • Telomere Homeostasis*
  • Telomere*

Substances

  • DNA Primers
  • Interferon-beta