Molecular Evolution of the Vacuolar Iron Transporter (VIT) Family Genes in 14 Plant Species

Genes (Basel). 2019 Feb 14;10(2):144. doi: 10.3390/genes10020144.

Abstract

The vacuolar iron transporter (VIT) proteins are involved in the storage and transport of iron. However, the evolution of this gene family in plants is unknown. In this study, I first identified 114 VIT genes in 14 plant species and classified these genes into seven groups by phylogenetic analysis. Conserved gene organization and motif distribution implied conserved function in each group. I also found that tandem duplication, segmental duplication and transposition contributed to the expansion of this gene family. Additionally, several positive selection sites were identified. Divergent expression patterns of soybean VIT genes were further investigated in different development stages and under iron stress. Functional network analysis exhibited 211 physical or functional interactions. The results will provide the basis for further functional studies of the VIT genes in plants.

Keywords: evolution; expression; iron stress; soybean; vacuolar iron transporter.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Arabidopsis / genetics
  • Arabidopsis Proteins / genetics*
  • Cation Transport Proteins / genetics*
  • Evolution, Molecular*
  • Gene Expression Regulation, Plant
  • Glycine max / genetics
  • Iron / metabolism
  • Oryza / genetics
  • Phylogeny
  • Plant Proteins / genetics*
  • Vacuoles / genetics*
  • Vacuoles / metabolism

Substances

  • Arabidopsis Proteins
  • Cation Transport Proteins
  • Plant Proteins
  • VIT1 protein, Arabidopsis
  • Iron