CCR7 Chemokine Receptor-Inducible lnc-Dpf3 Restrains Dendritic Cell Migration by Inhibiting HIF-1α-Mediated Glycolysis

Immunity. 2019 Mar 19;50(3):600-615.e15. doi: 10.1016/j.immuni.2019.01.021. Epub 2019 Feb 26.

Abstract

CCR7 chemokine receptor stimulation induces rapid but transient dendritic cell (DC) migration toward draining lymph nodes, which is critical for the initiation of protective immunity and maintenance of immune homeostasis. The mechanisms for terminating CCR7-mediated DC migration remain incompletely understood. Here we have identified a long non-coding RNA lnc-Dpf3 whose feedback restrained CCR7-mediated DC migration. CCR7 stimulation upregulated lnc-Dpf3 via removing N6-methyladenosine (m6A) modification to prevent RNA degradation. DC-specific lnc-Dpf3 deficiency increased CCR7-mediated DC migration, leading to exaggerated adaptive immune responses and inflammatory injuries. Mechanistically, CCR7 stimulation activated the HIF-1α transcription factor pathway in DCs, leading to metabolic reprogramming toward glycolysis for DC migration. lnc-Dpf3 directly bound to HIF-1α and suppressed HIF-1α-dependent transcription of the glycolytic gene Ldha, thus inhibiting DC glycolytic metabolism and migratory capacity. We demonstrate a critical role for CCR7-inducible lnc-Dpf3 in coupling epigenetic and metabolic pathways to feedback-control DC migration and inflammatory responses.

Keywords: CCR7 chemokine receptor; dendritic cell migration; glycolysis; hypoxia-inducible factor 1-alpha; long non-coding RNA; m6A RNA methylation; metabolic reprogramming.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptive Immunity / genetics
  • Animals
  • Cell Line
  • Cell Movement / genetics*
  • DNA-Binding Proteins / genetics*
  • Dendritic Cells / pathology
  • Epigenesis, Genetic / genetics
  • Gene Expression Regulation / genetics
  • Glycolysis / genetics*
  • HEK293 Cells
  • Humans
  • Hypoxia-Inducible Factor 1, alpha Subunit / genetics*
  • Inflammation / genetics
  • Inflammation / pathology
  • Lymph Nodes / pathology
  • Metabolic Networks and Pathways / genetics
  • Mice
  • Mice, Inbred C57BL
  • Receptors, CCR7 / genetics*
  • Transcription Factors / genetics*
  • Transcription, Genetic / genetics
  • Up-Regulation / genetics

Substances

  • Ccr7 protein, mouse
  • DNA-Binding Proteins
  • Dpf3 protein, mouse
  • Hif1a protein, mouse
  • Hypoxia-Inducible Factor 1, alpha Subunit
  • Receptors, CCR7
  • Transcription Factors