Oligopeptide-CB[8] complexation with switchable binding pathways

Org Biomol Chem. 2019 Apr 3;17(14):3514-3520. doi: 10.1039/c9ob00592g.

Abstract

Host-guest complexes exhibiting a 1 : 1 binding stoichiometry need not consist of a single host and guest. A series of oligopeptides, which were previously reported to have abnormally high binding enthalpies were investigated to deduce whether they exist as a 2 : 2 quaternary or a 1 : 1 binary complex with cucurbit[8]uril (CB[8]). Through a systematic study of the sequence-specific binding pathways of peptide-CB[8] association, a phenylalanine-leucine dipeptide was found to be capable of switching from a 1 : 1 stoichiometric complex to a 2 : 1 complex. By studying the differences in size-based diffusion properties of these two binding modes, the presence of a 1 : 1 pairwise inclusion complex was verified for the regime where CB[8] is in excess. Findings in this study can be utilised to 'customise' the precise CB[8]-oligopeptide self-assembly pathway, acting as a useful toolbox in the design of supramolecular systems.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Bridged-Ring Compounds / chemistry*
  • Imidazoles / chemistry*
  • Molecular Structure
  • Oligopeptides / chemistry*
  • Thermodynamics

Substances

  • Bridged-Ring Compounds
  • Imidazoles
  • Oligopeptides
  • cucurbit(8)uril