Detection of protease and engineered phage-infected bacteria using peptide-graphene oxide nanosensors

Anal Bioanal Chem. 2019 May;411(12):2487-2492. doi: 10.1007/s00216-019-01766-6. Epub 2019 Mar 23.

Abstract

A peptide-graphene oxide nanosensor has been developed to detect tobacco etch virus (TEV) protease and bacteria infected with an engineered bacteriophage. In the detection strategy, a peptide (sequence: RKRFRENLYFQSCP) is tagged with fluorophores and graphene oxide (GO) is used to adsorb the peptides while quenching their fluorescence. In the presence of TEV protease, fluoropeptides are cleaved between glutamine (Q) and serine (S), resulting in the recovery of fluorescence signal. Based on the fluorescent intensity, the detection limit of TEV protease is 51 ng/μL. Additionally, we have utilized the sensing system to detect bacteria cells. Bacteriophages, which were engineered to carry TEV protease genes, were used to infect target bacteria (Escherichia coli) resulting in the translation and release of the protease. This allowed the estimation of bacteria at the concentration of 104 CFU/mL. This strategy has the potential to be developed as a multiplex detection platform of multiple bacterial species. Graphical abstract.

Keywords: Bacteria detection; Bacteriophage; Biosensor; Engineered phage; Graphene oxide; TEV protease.

MeSH terms

  • Amino Acid Sequence
  • Biosensing Techniques*
  • Coliphages / enzymology*
  • Coliphages / genetics
  • Coliphages / isolation & purification*
  • Colony Count, Microbial
  • Endopeptidases / genetics
  • Endopeptidases / isolation & purification*
  • Escherichia coli / virology*
  • Fluorescence
  • Fluorescent Dyes / chemistry
  • Gene Transfer Techniques*
  • Genes, Viral
  • Graphite / chemistry*
  • Limit of Detection
  • Microscopy, Atomic Force
  • Microscopy, Electron, Transmission
  • Nanoparticles*
  • Peptides / chemistry*
  • Proof of Concept Study

Substances

  • Fluorescent Dyes
  • Peptides
  • graphene oxide
  • Graphite
  • Endopeptidases
  • TEV protease