Suppressing microRNA-29c promotes biliary atresia-related fibrosis by targeting DNMT3A and DNMT3B

Cell Mol Biol Lett. 2019 Mar 11:24:10. doi: 10.1186/s11658-018-0134-9. eCollection 2019.

Abstract

This study was designed to investigate the potential role of microRNA-29c (miR-29c) in biliary atresia-related fibrosis. The expression of miR-29c was determined in 15 pairs of peripheral blood samples from infants with biliary atresia (BA) and infants with non-BA neonatal cholestasis using quantitative real-time PCR. EMT was established by induction with TGF-β1 in HIBEpiC cells. MiR-29c was inhibited by lipofectamine transfection. The expressions of proteins related to epithelial-mesenchymal transition (EMT), i.e., E-cadherin, N-cadherin and vimentin, were determined using quantitative real-time PCR and western blotting. Direct interaction between miR-29c and DNMT3A and DNMT3B was identified using a luciferase reporter assay. The expressions of DNMT3A and DNMT3B were suppressed by treatment with SGI-1027. Patients with BA showed significantly lower miR-29c levels in peripheral blood samples than the control subjects. In vitro, TGF-β1-induced EMT significantly decreased the expression of miR-29c. Downregulation of miR-29c had a promotional effect on BA-related fibrosis in HIBEpiC cells, as confirmed by the decrease in E-cadherin and increase in N-cadherin and vimentin levels. MiR-29c was found to target the 3'UTR of DNMT3A and DNMT3B and inhibit their expression. Suppression of DNMT3A and DNMT3B reversed the effects of miR-29c downregulation on BA-related fibrosis in HIBEpiC cells. These data suggest that BA-related fibrosis is closely associated with the occurrence of EMT in HIBEpiC cells. MiR-29c might be a candidate for alleviating BA-related fibrosis by targeting DNMT3A and DNMT3B.

Keywords: Biliary atresia; DNMT3A; DNMT3B; Epithelial–mesenchymal transition; Fibrosis; MiR-29c.

MeSH terms

  • Biliary Atresia / complications
  • Biliary Atresia / metabolism*
  • Biliary Atresia / physiopathology
  • DNA (Cytosine-5-)-Methyltransferases / genetics*
  • DNA (Cytosine-5-)-Methyltransferases / metabolism
  • DNA Methyltransferase 3A
  • DNA Methyltransferase 3B
  • Epithelial-Mesenchymal Transition*
  • Fibrosis / etiology
  • Fibrosis / metabolism*
  • Fibrosis / physiopathology
  • Gene Expression Regulation
  • Humans
  • Infant
  • MicroRNAs / genetics
  • MicroRNAs / metabolism*

Substances

  • DNMT3A protein, human
  • MIRN29a microRNA, human
  • MicroRNAs
  • DNA (Cytosine-5-)-Methyltransferases
  • DNA Methyltransferase 3A