Evaluation of a crystallographic surrogate for kallikrein 5 in the discovery of novel inhibitors for Netherton syndrome

Acta Crystallogr F Struct Biol Commun. 2019 May 1;75(Pt 5):385-391. doi: 10.1107/S2053230X19003169. Epub 2019 Apr 26.

Abstract

The inhibition of kallikrein 5 (KLK5) has been identified as a potential strategy for treatment of the genetic skin disorder Netherton syndrome, in which loss-of-function mutations in the SPINK5 gene lead to down-regulation of the endogenous inhibitor LEKTI-1 and profound skin-barrier defects with severe allergic manifestations. To aid in the development of a medicine for this target, an X-ray crystallographic system was developed to facilitate fragment-guided chemistry and knowledge-based drug-discovery approaches. Here, the development of a surrogate crystallographic system in place of KLK5, which proved to be challenging to crystallize, is described. The biochemical robustness of the crystallographic surrogate and the suitability of the system for the study of small nonpeptidic fragments and lead-like molecules are demonstrated.

Keywords: GSK144; Netherton syndrome; kallikrein; medicinal chemistry; structure-guided design.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Baculoviridae / genetics
  • Baculoviridae / metabolism
  • Benzamidines / chemistry*
  • Benzamidines / pharmacology
  • Binding Sites
  • Cloning, Molecular
  • Crystallography, X-Ray
  • Drug Discovery
  • Gene Expression
  • Genetic Vectors / chemistry
  • Genetic Vectors / metabolism
  • Humans
  • Kallikreins / antagonists & inhibitors
  • Kallikreins / chemistry*
  • Kallikreins / genetics
  • Kallikreins / metabolism
  • Kinetics
  • Models, Molecular
  • Mutation
  • Netherton Syndrome / drug therapy
  • Netherton Syndrome / enzymology
  • Protease Inhibitors / chemistry*
  • Protease Inhibitors / pharmacology
  • Protein Binding
  • Protein Structure, Secondary
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sf9 Cells
  • Spodoptera
  • Static Electricity
  • Substrate Specificity

Substances

  • Benzamidines
  • Protease Inhibitors
  • Recombinant Proteins
  • KLK5 protein, human
  • KLK6 protein, human
  • Kallikreins