Unravelling the lipoyl-relay of exogenous lipoate utilization in Bacillus subtilis

Mol Microbiol. 2019 Jul;112(1):302-316. doi: 10.1111/mmi.14271. Epub 2019 May 20.

Abstract

Lipoate is an essential cofactor for key enzymes of oxidative and one-carbon metabolism. It is covalently attached to E2 subunits of dehydrogenase complexes and GcvH, the H subunit of the glycine cleavage system. Bacillus subtilis possess two protein lipoylation pathways: biosynthesis and scavenging. The former requires octanoylation of GcvH, insertion of sulfur atoms and amidotransfer of the lipoate to E2s, catalyzed by LipL. Lipoate scavenging is mediated by a lipoyl protein ligase (LplJ) that catalyzes a classical two-step ATP-dependent reaction. Although these pathways were thought to be redundant, a ∆lipL mutant, in which the endogenous lipoylation pathway of E2 subunits is blocked, showed growth defects in minimal media even when supplemented with lipoate and despite the presence of a functional LplJ. In this study, we demonstrate that LipL is essential to modify E2 subunits of branched chain ketoacid and pyruvate dehydrogenases during lipoate scavenging. The crucial role of LipL during lipoate utilization relies on the strict substrate specificity of LplJ, determined by charge complementarity between the ligase and the lipoylable subunits. This new lipoyl-relay required for lipoate scavenging highlights the relevance of the amidotransferase as a valid target for the design of new antimicrobial agents among Gram-positive pathogens.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acyltransferases / metabolism
  • Amino Acid Oxidoreductases
  • Amino Acid Sequence
  • Bacillus subtilis / genetics
  • Bacillus subtilis / metabolism*
  • Bacterial Proteins / metabolism
  • Glutamate Synthase / metabolism
  • Ketoglutarate Dehydrogenase Complex / metabolism
  • Lipoylation / physiology*
  • Multienzyme Complexes
  • Peptide Synthases / genetics
  • Peptide Synthases / metabolism*
  • Substrate Specificity
  • Thioctic Acid / genetics
  • Transferases

Substances

  • Bacterial Proteins
  • Multienzyme Complexes
  • glycine cleavage system
  • Thioctic Acid
  • Ketoglutarate Dehydrogenase Complex
  • Amino Acid Oxidoreductases
  • Glutamate Synthase
  • Transferases
  • Acyltransferases
  • Peptide Synthases
  • lipoate-protein ligase