LRRC59 modulates type I interferon signaling by restraining the SQSTM1/p62-mediated autophagic degradation of pattern recognition receptor DDX58/RIG-I

Autophagy. 2020 Mar;16(3):408-418. doi: 10.1080/15548627.2019.1615303. Epub 2019 May 22.

Abstract

DDX58/RIG-I, is a critical pattern recognition receptor for viral RNA, which plays an essential role in antiviral immunity. Its posttranslational modifications and stability are tightly regulated to mediate the moderate production of type I IFN to maintain the immune homeostasis. Recently, we reported that macroautophagy/autophagy balances type I IFN signaling through selective degradation of ISG15-associated DDX58 via LRRC25. However, the regulatory mechanism about the autophagic degradation of DDX58 remains largely undefined. Here, we identified LRRC59 as a vital positive regulator of DDX58-mediated type I IFN signaling. Upon virus infection, LRRC59 specifically interacted with ISG15-associated DDX58 and blocked its association with LRRC25, the secondary receptor to deliver DDX58 to autophagosomes for SQSTM1/p62-dependent degradation, leading to the stronger antiviral immune responses. Thus, our study reveals a novel regulatory role of selective autophagy in innate antiviral responses mediated by the cross-regulation of LRRC family members. These data further provide insights into the crosstalk between autophagy and innate immune responses.Abbreviations: ATG: Autophagy-related; Baf A1: Bafilomycin A1; DDX58/RIG-I: DEAD [Asp-Glu-Ala-Asp] box polypeptide 58; EV: Empty vector; IC poly[I:C]: Intracellular polyriboinosinic polyribocytidylic acid; IFIH1/MDA5: Interferon induced with helicase C domain 1; IFN: Interferon; ISG15: ISG15 ubiquitin like modifier; IKBKE: Inhibitor of nuclear factor kappa B kinase subunit epsilon; IRF3: Interferon regulatory factor 3; KO: Knockout; LRRC: Leucine rich repeat containing; MAVS: Mitochondrial antiviral signaling protein; CGAS/MB21D1: Cyclic GMP-AMP synthase; SeV: Sendai virus; siRNA: small interfering RNA; SQSTM1/p62: Sequestosome 1; TBK1: TANK binding kinase 1; TLR: Toll like receptor; TMEM173/STING: Transmembrane protein 173; VSV: Vesicular stomatitis virus; WT: Wild type.

Keywords: Autophagic degradation; DDX58/RIG-I; LRRC59; cargo receptor; type I interferon.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Autophagy*
  • Cell Line
  • Cytokines / metabolism
  • DEAD Box Protein 58 / chemistry
  • DEAD Box Protein 58 / metabolism*
  • Humans
  • Interferon Type I / metabolism*
  • Membrane Proteins / metabolism*
  • Models, Biological
  • Protein Binding
  • Protein Stability
  • Proteolysis*
  • Receptors, Immunologic
  • Sequestosome-1 Protein / metabolism*
  • Signal Transduction*
  • Ubiquitins / metabolism
  • Virus Diseases / metabolism

Substances

  • Cytokines
  • Interferon Type I
  • LRRC59 protein, human
  • Membrane Proteins
  • Receptors, Immunologic
  • SQSTM1 protein, human
  • Sequestosome-1 Protein
  • Ubiquitins
  • ISG15 protein, human
  • RIGI protein, human
  • DEAD Box Protein 58