A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography

IUCrJ. 2019 Apr 19;6(Pt 3):454-464. doi: 10.1107/S2052252519003622. eCollection 2019 May 1.

Abstract

Determining optimal conditions for the production of well diffracting crystals is a key step in every biocrystallography project. Here, a microfluidic device is described that enables the production of crystals by counter-diffusion and their direct on-chip analysis by serial crystallography at room temperature. Nine 'non-model' and diverse biomacromolecules, including seven soluble proteins, a membrane protein and an RNA duplex, were crystallized and treated on-chip with a variety of standard techniques including micro-seeding, crystal soaking with ligands and crystal detection by fluorescence. Furthermore, the crystal structures of four proteins and an RNA were determined based on serial data collected on four synchrotron beamlines, demonstrating the general applicability of this multipurpose chip concept.

Keywords: ChipX3; counter-diffusion; crystallization; ligand soaking; macromolecule; microfluidics; protein structure; room temperature; seeding; serial crystallography; trace fluorescent labeling.

Grants and funding

This work was funded by Agence Nationale de la Recherche grants ANR-11-LABX-0057_MITOCROSS, ANR-10-LABX-0036_NETRN, and ANR-13-BS07-0007-01. Ministère des Affaires Etrangères grant PROCOPE Hubert Curien to Claude Sauter and Mario Mörl. Deutsche Forschungsgemeinschaft grant Mo 634/10-1 to Mario Mörl and Heike Betat. Université de Strasbourg grant Initiative d'excellence (IDEX) to Claude Sauter and Raphaël de Wijn. Centre National de la Recherche Scientifique grant MRCT-2012_PTI_UPR9002 to Claude Sauter.