Effects of environmental pollution on the rDNAomics of Amazonian fish

Environ Pollut. 2019 Sep;252(Pt A):180-187. doi: 10.1016/j.envpol.2019.05.112. Epub 2019 May 22.

Abstract

Pollution is a growing environmental problem throughout the world, and the impact of human activities on biodiversity and the genetic variability of natural populations is increasingly preoccupying, given that adaptive processes depend on this variability, in particular that found in the repetitive DNA. In the present study, the mitochondrial DNA (COI) and the distribution of repetitive DNA sequences (18S and 5S rDNA) in the fish genome were analysed in fish populations inhabiting both polluted and unpolluted waters in the northern Amazon basin. The results indicate highly complex ribosomal sequences in the fish genome from the polluted environment because these sequences are involved primarily in the maintenance of genome integrity, mediated by a systematic increase in the number of copies of the ribosomal DNA in response to changes in environmental conditions.

Keywords: COI; Heterochromatin; Human activity; Repetitive DNA; Ribosomal gene.

MeSH terms

  • Animals
  • Brazil
  • DNA, Mitochondrial / genetics*
  • DNA, Ribosomal
  • Fishes / genetics*
  • Genome / genetics
  • RNA, Ribosomal, 18S / genetics*
  • RNA, Ribosomal, 5S / genetics*
  • Repetitive Sequences, Nucleic Acid / genetics*
  • Rivers / chemistry
  • Seafood
  • Water Pollution / adverse effects*

Substances

  • DNA, Mitochondrial
  • DNA, Ribosomal
  • RNA, Ribosomal, 18S
  • RNA, Ribosomal, 5S