Accurate and cost-effective prediction of HBsAg titer in industrial scale fermentation process of recombinant Pichia pastoris by using neural network based soft sensor

Biotechnol Appl Biochem. 2019 Jul;66(4):681-689. doi: 10.1002/bab.1785. Epub 2019 Jun 24.

Abstract

In the current work, the attempt was made to apply best-fitted artificial neural network (ANN) architecture and the respective training process for predicting final titer of hepatitis B surface antigen (HBsAg), produced intracellularly by recombinant Pichia pastoris Mut+ in the commercial scale. For this purpose, in large-scale fed-batch fermentation, using methanol for HBsAg induction and cell growth, three parameters of average specific growth rate, biomass yield, and dry biomass concentration-in the definite integral form with respect to fermentation time-were selected as input vectors; the final concentration of HBsAg was selected for the ANN output. Used dataset consists of 38 runs from previous batches; feed-forward ANN 3:5:1 with training algorithm of backpropagation based on a Bayesian regularization was trained and tested with a high degree of accuracy. Implementing the verified ANN for predicting the HBsAg titer of the five new fermentation runs, excluded from the dataset, in the full-scale production, the coefficient of regression and root-mean-square error were found to be 0.969299 and 2.716774, respectively. These results suggest that this verified soft sensor could be an excellent alternative for the current relatively expensive and time-intensive analytical techniques such as enzyme-linked immunosorbent assay in the biopharmaceutical industry.

Keywords: ANN; HBsAg; Mut+ Pichia pastoris; large-scale fermentation; parameter estimation; soft sensor; titer.

MeSH terms

  • Bioreactors* / economics
  • Fermentation*
  • Hepatitis B Surface Antigens / chemistry
  • Hepatitis B Surface Antigens / economics
  • Hepatitis B Surface Antigens / metabolism*
  • Neural Networks, Computer*
  • Pichia / chemistry
  • Pichia / metabolism*
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / economics
  • Recombinant Proteins / metabolism

Substances

  • Hepatitis B Surface Antigens
  • Recombinant Proteins