Chemical Modification of 1-Aminocyclopropane Carboxylic Acid (ACC) Oxidase: Cysteine Mutational Analysis, Characterization, and Bioconjugation with a Nitroxide Spin Label

Mol Biotechnol. 2019 Sep;61(9):650-662. doi: 10.1007/s12033-019-00191-5.

Abstract

1-Aminocyclopropane carboxylic acid oxidase (ACCO) catalyzes the last step of ethylene biosynthesis in plants. Although some sets of structures have been described, there are remaining questions on the active conformation of ACCO and in particular, on the conformation and potential flexibility of the C-terminal part of the enzyme. Several techniques based on the introduction of a probe through chemical modification of amino acid residues have been developed for determining the conformation and dynamics of proteins. Cysteine residues are recognized as convenient targets for selective chemical modification of proteins, thanks to their relatively low abundance in protein sequences and to their well-mastered chemical reactivity. ACCOs have generally 3 or 4 cysteine residues in their sequences. By a combination of approaches including directed mutagenesis, activity screening on cell extracts, biophysical and biochemical characterization of purified enzymes, we evaluated the effect of native cysteine replacement and that of insertion of cysteines on the C-terminal part in tomato ACCO. Moreover, we have chosen to use paramagnetic labels targeting cysteine residues to monitor potential conformational changes by electron paramagnetic resonance (EPR). Given the level of conservation of the cysteines in ACCO from different plants, this work provides an essential basis for the use of cysteine as probe-anchoring residues.

Keywords: ACC oxidase; Cysteine; EPR; Ethylene; Iron; Mutagenesis; Nitroxide; Protein chemical modification.

MeSH terms

  • Amino Acid Oxidoreductases / chemistry*
  • Amino Acid Oxidoreductases / genetics
  • Amino Acid Oxidoreductases / metabolism
  • Amino Acid Substitution
  • Amino Acids, Cyclic / chemistry*
  • Amino Acids, Cyclic / metabolism
  • Binding Sites
  • Cloning, Molecular
  • Cysteine / chemistry*
  • Cysteine / metabolism
  • Electron Spin Resonance Spectroscopy
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Ethylenes / biosynthesis
  • Ethylenes / chemistry*
  • Gene Expression
  • Genetic Vectors / chemistry
  • Genetic Vectors / metabolism
  • Kinetics
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Nitrogen Oxides / chemistry*
  • Nitrogen Oxides / metabolism
  • Plant Proteins / chemistry*
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Protein Binding
  • Protein Conformation, alpha-Helical
  • Protein Conformation, beta-Strand
  • Protein Interaction Domains and Motifs
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Solanum lycopersicum / chemistry
  • Solanum lycopersicum / enzymology*
  • Spin Labels
  • Substrate Specificity

Substances

  • Amino Acids, Cyclic
  • Ethylenes
  • Nitrogen Oxides
  • Plant Proteins
  • Recombinant Proteins
  • Spin Labels
  • 1-aminocyclopropane-1-carboxylic acid
  • ethylene
  • Amino Acid Oxidoreductases
  • 1-aminocyclopropane-1-carboxylic acid oxidase
  • nitroxyl
  • Cysteine