Association of HLA-DQB1*03:01 and DRB1*11:01 with spontaneous clearance of hepatitis C virus in Chinese Li ethnicity, an ethnic group genetically distinct from Chinese Han ethnicity and infected with unique HCV subtype

J Med Virol. 2019 Oct;91(10):1830-1836. doi: 10.1002/jmv.25531. Epub 2019 Jul 5.

Abstract

Specific human leukocyte antigen (HLA) class I and class II alleles have been associated with spontaneous clearance or persistent infection of hepatitis C virus (HCV), which seemed to be restricted by the host's ethnicity and viral genotype. Recently we reported a high prevalence and spontaneous clearance rate of HCV in a cohort of Chinese Li ethnicity who were infected with new variants of HCV genotype 6. In this study, we found that the distribution of HLA class I and class II alleles in HCV infected individuals of Chinese Li ethnicity (n = 143) was distinct from that of Chinese Han ethnicity which was reported in our previous study. HLA-DRB1*11:01 and DQB1*03:01 were more prevalent in Chinese Li subjects who cleared HCV spontaneously than those who were chronically infected (P = .036 and P = .024, respectively), which were consistent with our previous report regarding the Chinese Han population. Multivariate logistic regression analysis showed that DQB1*03:01 (odds ratio = 3.899, P = .017), but not DRB1*11:01, associated with HCV spontaneous clearance, independent of age, sex, and IFNL3 genotype. Because DQB1*03:01 and DRB1*11:01 were tightly linked because of linkage disequilibrium, our results clearly supported the associations of these two alleles with HCV spontaneous clearance in Chinese Li as well as Han ethnicity.

Keywords: genotype; hepatitis C virus; human leukocyte antigen; race; self-resolved infection.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Alleles
  • Asian People / genetics*
  • China
  • Ethnicity
  • Female
  • Genetic Predisposition to Disease
  • Genotype
  • HLA-DQ beta-Chains / genetics
  • HLA-DQ beta-Chains / metabolism*
  • HLA-DRB1 Chains / genetics
  • HLA-DRB1 Chains / metabolism*
  • Hepacivirus / immunology*
  • Hepatitis C, Chronic / genetics
  • Hepatitis C, Chronic / immunology*
  • Humans
  • Interferons / genetics
  • Male
  • Polymorphism, Single Nucleotide

Substances

  • HLA-DQ beta-Chains
  • HLA-DQB1 antigen
  • HLA-DRB1 Chains
  • interferon-lambda, human
  • Interferons