Guidance of circular RNAs to proteins' behavior as binding partners

Cell Mol Life Sci. 2019 Nov;76(21):4233-4243. doi: 10.1007/s00018-019-03216-z. Epub 2019 Jul 3.

Abstract

Circular RNAs (circRNAs) are single-stranded and covalently closed back-splicing products of pre-mRNAs. They can be derived from exons, introns, or exons with intron retained between exons of transcripts, as well as antisense transcripts. CircRNAs have been reported to function as microRNA sponges, regulate gene transcription mediated by RNA polymerase II, and modulate the splicing or stability of mRNA. However, emerging studies demonstrate that they affect the behavior of proteins via direct interactions with them. Here, we summarize that by binding directly with proteins; circRNAs can facilitate their nuclear or cytoplasmic localizations, regulate their functions or stability, promote or inhibit the interactions between them, or influence the interactions between them and DNA. Furthermore, these circRNA-binding proteins contain transcription factors, RNA processing proteins, proteases, and some other RNA-binding proteins. As a consequence, circRNAs are involved in the regulation of multiple physiological or pathological processes, including tumorigenesis, atherosclerosis, wound repair, cardiac senescence, myocardial ischemia/reperfusion injury, and so forth. Nonetheless, it is worthwhile to further explore more types of proteins that interact with circRNAs, which would be helpful in revealing other unknown biological functions of circRNAs that guide the variation in behavior of cellular proteins.

Keywords: CircRNA–protein interaction; Circular RNA; Protein function; Protein localization.

Publication types

  • Review

MeSH terms

  • Animals
  • DNA-Binding Proteins / metabolism
  • Gene Expression Regulation / physiology
  • Humans
  • Protein Binding
  • Protein Stability
  • Protein Transport / genetics
  • Proteins / metabolism*
  • RNA / metabolism
  • RNA / physiology*
  • RNA, Circular
  • RNA-Binding Proteins / metabolism

Substances

  • DNA-Binding Proteins
  • Proteins
  • RNA, Circular
  • RNA-Binding Proteins
  • RNA