Cis/Trans Energetics in Epoxide, Thiirane, Aziridine and Phosphirane Containing Cyclopentanols: Effects of Intramolecular OH⋯O, S, N and P Contacts

Molecules. 2019 Jul 10;24(14):2523. doi: 10.3390/molecules24142523.

Abstract

A recent computational analysis of the stabilizing intramolecular OH⋯O contact in 1,2-dialkyl-2,3-epoxycyclopentanol diastereomers has been extended to thiiriane, aziridine and phosphirane analogues. Density functional theory (DFT), second-order Møller-Plesset perturbation theory (MP2) and CCSD(T) coupled-cluster computations with simple methyl and ethyl substituents indicate that electronic energies of the c i s isomers are lowered by roughly 3 to 4 kcal mol-1 when the OH group of these cyclopentanol systems forms an intramolecular contact with the O, S, N or P atom on the adjacent carbon. The results also suggest that S and P can participate in these stabilizing intramolecular interactions as effectively as O and N in constrained molecular environments. The stabilizing intramolecular OH⋯O, OH⋯S, OH⋯N and OH⋯P contacts also increase the covalent OH bond length and significantly decrease the OH stretching vibrational frequency in every system with shifts typically on the order of -41 cm-1.

Keywords: coupled-cluster theory; density functional theory (DFT); intramolecular hydrogen bonding; semipinacol rearrangement; vibrational frequencies.

MeSH terms

  • Aziridines / chemistry*
  • Cyclopentanes / chemistry*
  • Density Functional Theory
  • Epoxy Compounds / chemistry*
  • Hydrogen Bonding
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Models, Theoretical*
  • Molecular Conformation
  • Molecular Structure
  • Sulfides / chemistry*

Substances

  • Aziridines
  • Cyclopentanes
  • Epoxy Compounds
  • Sulfides
  • cyclopentanol
  • aziridine
  • ethylene sulfide