Protein Labeling and Bioconjugation Using N-Myristoyltransferase

Methods Mol Biol. 2019:2033:149-165. doi: 10.1007/978-1-4939-9654-4_11.

Abstract

Methods that allow for labeling of proteins cotranslationally within protein expression systems have had wide-ranging applications in health, engineering, and medicine. Bioorthogonal chemistries that allow for conjugation of proteins or biomolecules of interest to substrates (fluorophores, gold nanoparticles, polymers, etc.) in living cells without prior enrichment or purification have likewise enabled advances in technology to study and engineer cellular and biomolecular systems. At the intersection of these, chemoenzymatic labeling of proteins at specific sites of interest and their subsequent selective bioconjugation to substrates without prior purification has dramatically streamlined workflows that allow proteins to reside in the native expression volumes as long as possible prior to conjugation, be readily isolated upon conjugation, and remain functionally active after conjugation. Here we present methods and protocols to express and label proteins of interest at the N-terminus with azide derivatives of myristic acid, a small, soluble, 14-carbon fatty acid, and conjugate the labeled protein to fluorophores and gold nanoparticle substrates. These methods can be extended to label proteins with other myristoyl derivatives and to conjugation to other solid or polymeric substrates of interest.

Keywords: 12-Azidododecanoic acid (12-ADA); Azide–alkyne cycloaddition; Bioconjugation; Bioorthogonal chemistry; Calmodulin; Chemoenzymatic; Click chemistry; CuAAC; Myristic acid; N-myristoyltransferase (NMT).

MeSH terms

  • Acyltransferases / chemistry*
  • Alkynes / chemistry
  • Azides / chemistry
  • Click Chemistry
  • Fluorescent Dyes / chemistry
  • Gold / chemistry
  • Metal Nanoparticles / chemistry
  • Myristic Acid / chemistry
  • Proteins / chemistry
  • Proteins / isolation & purification*
  • Proteomics / methods*
  • Staining and Labeling / methods*

Substances

  • Alkynes
  • Azides
  • Fluorescent Dyes
  • Proteins
  • Myristic Acid
  • Gold
  • Acyltransferases
  • glycylpeptide N-tetradecanoyltransferase