Reply to 'Reconciling disparate estimates of viral genetic diversity during human influenza infections'

doi:10.1038/s41588-019-0486-8

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. 2019 Sep;51(9):1301-1303.

doi: 10.1038/s41588-019-0486-8.

Reply to 'Reconciling disparate estimates of viral genetic diversity during human influenza infections'

Leo L M Poon¹, Timothy Song², David E Wentworth³, Edward C Holmes^{4

5}, Benjamin D Greenbaum⁶, Joseph S M Peiris¹, Benjamin J Cowling⁷, Elodie Ghedin⁸

Affiliations

¹ Division of Public Health Laboratory Sciences, School of Public Health, University of Hong Kong, Hong Kong, China.
² Memorial Sloan Kettering, New York, NY, USA.
³ Centers for Disease Control and Prevention, Atlanta, GA, USA.
⁴ Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Biological Sciences, University of Sydney, Sydney, New South Wales, Australia.
⁵ Sydney Medical School, University of Sydney, Sydney, New South Wales, Australia.
⁶ Tisch Cancer Institute, Departments of Medicine, Hematology and Medical Oncology, and Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
⁷ Division of Epidemiology and Biostatistics, School of Public Health, University of Hong Kong, Hong Kong, China.
⁸ Center for Genomics and Systems Biology, Department of Biology, New York University, New York, NY, USA. elodie.ghedin@nyu.edu.

PMID: 31406345
DOI: 10.1038/s41588-019-0486-8

Comment

Reply to 'Reconciling disparate estimates of viral genetic diversity during human influenza infections'

Leo L M Poon et al. Nat Genet. 2019 Sep.

. 2019 Sep;51(9):1301-1303.

doi: 10.1038/s41588-019-0486-8.

Authors

Leo L M Poon¹, Timothy Song², David E Wentworth³, Edward C Holmes^{4

5}, Benjamin D Greenbaum⁶, Joseph S M Peiris¹, Benjamin J Cowling⁷, Elodie Ghedin⁸

Affiliations

¹ Division of Public Health Laboratory Sciences, School of Public Health, University of Hong Kong, Hong Kong, China.
² Memorial Sloan Kettering, New York, NY, USA.
³ Centers for Disease Control and Prevention, Atlanta, GA, USA.
⁴ Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Biological Sciences, University of Sydney, Sydney, New South Wales, Australia.
⁵ Sydney Medical School, University of Sydney, Sydney, New South Wales, Australia.
⁶ Tisch Cancer Institute, Departments of Medicine, Hematology and Medical Oncology, and Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
⁷ Division of Epidemiology and Biostatistics, School of Public Health, University of Hong Kong, Hong Kong, China.
⁸ Center for Genomics and Systems Biology, Department of Biology, New York University, New York, NY, USA. elodie.ghedin@nyu.edu.

PMID: 31406345
DOI: 10.1038/s41588-019-0486-8

No abstract available

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Comment on

Quantifying influenza virus diversity and transmission in humans.
Poon LL, Song T, Rosenfeld R, Lin X, Rogers MB, Zhou B, Sebra R, Halpin RA, Guan Y, Twaddle A, DePasse JV, Stockwell TB, Wentworth DE, Holmes EC, Greenbaum B, Peiris JS, Cowling BJ, Ghedin E. Poon LL, et al. Nat Genet. 2016 Feb;48(2):195-200. doi: 10.1038/ng.3479. Epub 2016 Jan 4. Nat Genet. 2016. PMID: 26727660 Free PMC article.
Reconciling disparate estimates of viral genetic diversity during human influenza infections.
Xue KS, Bloom JD. Xue KS, et al. Nat Genet. 2019 Sep;51(9):1298-1301. doi: 10.1038/s41588-019-0349-3. Nat Genet. 2019. PMID: 30804564 Free PMC article. No abstract available.

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Han AX, Felix Garza ZC, Welkers MR, Vigeveno RM, Tran ND, Le TQM, Pham Quang T, Dang DT, Tran TNA, Ha MT, Nguyen TH, Le QT, Le TH, Hoang TBN, Chokephaibulkit K, Puthavathana P, Nguyen VVC, Nghiem MN, Nguyen VK, Dao TT, Tran TH, Wertheim HF, Horby PW, Fox A, van Doorn HR, Eggink D, de Jong MD, Russell CA. Han AX, et al. Elife. 2021 Aug 3;10:e68917. doi: 10.7554/eLife.68917. Elife. 2021. PMID: 34342576 Free PMC article.

References

1. Xue, K. S. & Bloom, J. D. Nat. Genet. https://doi.org/10.1038/s41588-019-0349-3 (2019). - DOI - PubMed
1. Poon, L. L. et al. Nat. Genet. 48, 195–200 (2016). - DOI
1. Zhou, B. et al. J. Virol. 83, 10309–10313 (2009). - DOI
1. Djikeng, A. et al. BMC Genom. 9, 5 (2008). - DOI
1. Bolger, A. M., Lohse, M. & Usadel, B. Bioinformatics 30, 2114–2120 (2014). - DOI

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[1] Xue, K. S. & Bloom, J. D. Nat. Genet. https://doi.org/10.1038/s41588-019-0349-3 (2019). - DOI - PubMed

[2] Xue, K. S. & Bloom, J. D. Nat. Genet. https://doi.org/10.1038/s41588-019-0349-3 (2019). - DOI - PubMed

[3] Poon, L. L. et al. Nat. Genet. 48, 195–200 (2016). - DOI

[4] Poon, L. L. et al. Nat. Genet. 48, 195–200 (2016). - DOI

[5] Zhou, B. et al. J. Virol. 83, 10309–10313 (2009). - DOI

[6] Zhou, B. et al. J. Virol. 83, 10309–10313 (2009). - DOI

[7] Djikeng, A. et al. BMC Genom. 9, 5 (2008). - DOI

[8] Djikeng, A. et al. BMC Genom. 9, 5 (2008). - DOI

[9] Bolger, A. M., Lohse, M. & Usadel, B. Bioinformatics 30, 2114–2120 (2014). - DOI

[10] Bolger, A. M., Lohse, M. & Usadel, B. Bioinformatics 30, 2114–2120 (2014). - DOI

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Reply to 'Reconciling disparate estimates of viral genetic diversity during human influenza infections'

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Reply to 'Reconciling disparate estimates of viral genetic diversity during human influenza infections'

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