A panel of DNA methylated markers predicts metastasis of pN0M0 gastric carcinoma: a prospective cohort study

Br J Cancer. 2019 Oct;121(7):529-536. doi: 10.1038/s41416-019-0552-0. Epub 2019 Aug 21.

Abstract

Background: The aim of this prospective study was to evaluate the feasibility of predicting GC metastasis using CDH1, GFRA1, P16 and ZNF382 DNA methylation as biomarkers.

Methods: 198 GC patients without metastasis at the time of surgery resection were recruited into the double-blind cohort (NCT02159339). Gene methylation was analysed using MethyLight assays. GC metastasis and survival data were obtained from 178 patients with 94.7% compliance during follow-up.

Results: Twenty six cases of metastasis and 5 cases of recurrence were observed in 178 cases (17.4%) during the follow-up (median, 62.7 months). The GC metastasis rate for GFRA1 methylation-positive patients was significantly reduced compared with GFRA1 methylation-negative patients (odds ratio [OR]: 0.23, 95% confidence interval [CI] 0.08-0.66). Similar results were also observed using ZNF382 methylation as a predictor (OR: 0.17, 95% CI 0.06-0.47). A risk score including methylation of GFRA1 and ZNF382 was generated. The metastasis rate was significantly increased in high-risk GC patients (OR: 4.71, 95% CI: 1.85-12.00). GC patients with high risk had a shorter overall survival, especially for patients with stage I GC (P = 0.024).

Conclusions: The combination of GFRA1 and ZNF382 methylation is a biomarker panel for the prediction of GC metastasis.

Publication types

  • Clinical Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antigens, CD / genetics*
  • Biomarkers, Tumor / genetics
  • Cadherins / genetics*
  • Collagen Type II / genetics
  • Confidence Intervals
  • DNA Methylation*
  • DNA-Binding Proteins / genetics*
  • Double-Blind Method
  • Feasibility Studies
  • Female
  • Genes, Neoplasm
  • Genes, p16*
  • Genetic Markers
  • Glial Cell Line-Derived Neurotrophic Factor Receptors / genetics*
  • Humans
  • Male
  • Middle Aged
  • Neoplasm Metastasis
  • Neoplasm Recurrence, Local
  • Neoplasm Staging
  • Odds Ratio
  • Prospective Studies
  • Risk
  • Stomach Neoplasms / genetics*
  • Stomach Neoplasms / mortality
  • Stomach Neoplasms / pathology
  • Survival Analysis
  • Transcription Factors / genetics*

Substances

  • Antigens, CD
  • Biomarkers, Tumor
  • CDH1 protein, human
  • COL2A1 protein, human
  • Cadherins
  • Collagen Type II
  • DNA-Binding Proteins
  • GFRA1 protein, human
  • Genetic Markers
  • Glial Cell Line-Derived Neurotrophic Factor Receptors
  • Transcription Factors
  • ZNF382 protein, human

Associated data

  • ClinicalTrials.gov/NCT02159339