MALDI-TOF Mass Spectrometry-Based High-Throughput Screening for Inhibitors of the Cytosolic DNA Sensor cGAS

SLAS Discov. 2020 Apr;25(4):372-383. doi: 10.1177/2472555219880185. Epub 2019 Oct 4.

Abstract

Comprehensive and unbiased detection methods are a prerequisite for high-throughput screening (HTS) campaigns within drug discovery research. Label-free matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry (MS) has been introduced as an HTS-compatible readout for biochemical test systems to support the drug discovery process. So far, reported HTS applications were based on surface-modified systems or proof-of-concept studies. We present the utilization of a MALDI-TOF-based screening platform to identify inhibitors of human cyclic GMP-AMP synthase (cGAS), a mediator of innate immune response whose aberration has been causally correlated to a number of inflammatory disorders. In this context, the development and validation of a MALDI-TOF-based activity assay is reported to demonstrate fast, robust, and accurate detection of chemical cGAS inhibition by direct quantification of the physiological reaction product cyclic GMP-ATP (cGAMP). Results from a screen of a diverse library of more than 1 million small molecules in 1536-well format against the catalytic cGAS activity are presented with excellent assay performance and data quality. Identified hits were qualified in dose-response experiments and confirmed by RapidFire-MS measurements. Conclusively, the presented data provide the first proof of applicability of direct automated MALDI-TOF MS as a readout strategy for large-scale drug discovery HTS campaigns.

Keywords: MALDI-TOF; cGAS; drug discovery; high-throughput screening; mass spectrometry.

MeSH terms

  • Cytosol / enzymology
  • DNA / drug effects
  • DNA / genetics*
  • Drug Discovery
  • Enzyme Inhibitors / isolation & purification
  • Enzyme Inhibitors / pharmacology
  • High-Throughput Screening Assays*
  • Humans
  • Nucleotidyltransferases / antagonists & inhibitors*
  • Nucleotidyltransferases / genetics
  • Small Molecule Libraries / pharmacology
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization*

Substances

  • Enzyme Inhibitors
  • Small Molecule Libraries
  • DNA
  • Nucleotidyltransferases
  • cGAS protein, human