Evaluation of an optimized method to directly identify bacteria from positive blood cultures using MALDI-TOF mass spectrometry

J Clin Lab Anal. 2020 Apr;34(4):e23119. doi: 10.1002/jcla.23119. Epub 2019 Nov 13.

Abstract

Background: Although various methods have been developed to directly identify bacteria from positive blood cultures by matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS), the necessity of using commercial kits still leads to a high cost and long assay time. Moreover, few evaluations of these methods have been conducted. This study aimed to evaluate the feasibility of an optimized MALDI-TOF MS method for direct identification of bacteria in positive blood cultures.

Methods: A total of 829 non-repeated positive cultures were collected from July 2018 to August 2019, and direct identification was performed by an optimized MALDI-TOF MS method. The same positive blood cultures were sub-cultivated to obtain a single bacterial colony and identified by classical biochemical BD testing, which is the gold standard to compare the accuracy of direct identification of positive blood cultures by MALDI-TOF MS.

Results: After excluding 7 false-positive samples from the 829 positive blood cultures, the most accurate rate of direct identification by this optimized MALDI-TOF MS method was for gram-negative bacteria (91.5%), followed by gram-positive bacteria (88.3%), fungi (84.8%), anaerobic bacteria (80%), and other rare bacteria (66.67%).

Conclusion: Common bacteria in positive blood cultures can be identified directly within 1 hour by MALDI-TOF MS, and thus, this optimized method can be used as a primary identification method by clinicians. Routine implementation of this method may significantly increase the optimal utilization rate of antibiotics and decrease mortality in bacteremia patients.

Keywords: MALDI-TOF MS; bacteria; blood culture; identification.

Publication types

  • Evaluation Study

MeSH terms

  • Bacteriological Techniques / methods
  • Blood Culture / methods*
  • False Positive Reactions
  • Gram-Negative Bacteria / isolation & purification
  • Gram-Negative Bacterial Infections / blood*
  • Gram-Negative Bacterial Infections / diagnosis
  • Gram-Negative Bacterial Infections / microbiology
  • Gram-Positive Bacteria / isolation & purification
  • Gram-Positive Bacterial Infections / blood*
  • Gram-Positive Bacterial Infections / diagnosis
  • Gram-Positive Bacterial Infections / microbiology
  • Humans
  • Retrospective Studies
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods*
  • Yeasts / isolation & purification