GenePiper, a Graphical User Interface Tool for Microbiome Sequence Data Mining

Microbiol Resour Announc. 2020 Jan 2;9(1):e01195-19. doi: 10.1128/MRA.01195-19.


Amplicon sequencing of the 16S rRNA gene is commonly performed for the assessment and comparison of microbiomes. Here, we introduce GenePiper, an open-source R Shiny application that provides an easy-to-use interface, a wide range of analytical methods, and optimized graphical outputs for offline microbiome data analyses.