Characteristics of physiology of and genomic mutations in aggregation-enhanced mutants of Methanothermobacter sp. CaT2

Biosci Biotechnol Biochem. 2020 May;84(5):1047-1055. doi: 10.1080/09168451.2019.1709790. Epub 2020 Jan 3.

Abstract

The thermophilic hydrogenotrophic methanogen Methanothermobacter sp. CaT2 aggregates by itself. CaT2 is known to have a surface sugar layer and extracellular proteins that may be related to its aggregation. Aggregation-enhanced mutants, CHA001 and CHA002, were isolated after repeated cultivation for more than two years. When treated with proteinase K, CHA001 and CaT2 similarly exhibited a very low degree of aggregation and CHA002 exhibited less aggregation but still retained aggregation, suggesting protein-based aggregation via extracellular proteins in both CHA001 and CHA002, presumably via a putative membrane-bound and extracellularly protruding protein, MTCT_1020, identified previously. Genomic analysis revealed that CHA001 and CHA002 shared a missense mutation of MTCT_1348 and had distinct mutations. These results suggested that the MTCT_1348 mutation provides subsidiary support to the adhesive function of extracellular proteins and that there is an additional mutation(s) in CHA002 for the non-proteinous aggregation capability.

Keywords: Hydrogenotrophic methanogen; aggregation; aggregation factor; aggregation-enhanced mutant; genomic analysis.

MeSH terms

  • Archaeal Proteins / metabolism
  • DNA, Archaeal / genetics
  • DNA, Archaeal / isolation & purification
  • Extracellular Space / metabolism
  • Genome, Archaeal*
  • Methane / metabolism
  • Methanobacteriaceae / genetics*
  • Methanobacteriaceae / metabolism*
  • Microscopy, Electron, Scanning
  • Microscopy, Electron, Transmission
  • Microscopy, Phase-Contrast
  • Mutation*
  • Whole Genome Sequencing

Substances

  • Archaeal Proteins
  • DNA, Archaeal
  • Methane