Single-cell RNA sequencing of immune cells in gastric cancer patients

Aging (Albany NY). 2020 Feb 10;12(3):2747-2763. doi: 10.18632/aging.102774. Epub 2020 Feb 10.

Abstract

Cancer immunotherapy has achieved positive clinical responses in the treatment of various cancers, including gastric cancer (GC). In this study, we characterized the heterogeneity of T cells isolated from GC patients at the single-cell level using single-cell RNA sequencing. We identified different immune cell subtypes and their heterogeneous transcription factors and depicted their developmental trajectories. In particular, we focused on exhausted CD8+ cells and Tregs and discovered that, as compared to control, the IRF8 transcription factor was downregulated in CD8+ tumour-infiltrating lymphocytes (TILs) from GC tissues, and that GC patients with lower IRF8 levels in blood CD8+ T cells tended to be a at a more advanced disease stage. These findings provide a theoretical basis for targeted immune therapy in GC.

Keywords: exhausted; gastric cancer; immunotherapy; single-cell RNA sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Aged, 80 and over
  • CD8-Positive T-Lymphocytes / metabolism*
  • Case-Control Studies
  • Down-Regulation
  • Female
  • Humans
  • Interferon Regulatory Factors / genetics
  • Male
  • Sequence Analysis, RNA / methods*
  • Single-Cell Analysis*
  • Stomach Neoplasms / immunology*
  • T-Lymphocytes, Regulatory / metabolism*

Substances

  • Interferon Regulatory Factors
  • interferon regulatory factor-8