Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source

BMC Microbiol. 2020 Mar 14;20(1):60. doi: 10.1186/s12866-020-01742-6.

Abstract

Background: Over the last years oleaginous yeasts have been studied for several energetic, oleochemical, medical and pharmaceutical purposes. However, only a small number of yeasts are known and have been deeply exploited. The search for new isolates with high oleaginous capacity becomes imperative, as well as the use of alternative and ecological carbon sources for yeast growth.

Results: In the present study a high-throughput screening comprising 366 distinct yeast isolates was performed by applying an optimised protocol based on two approaches: (I) yeast cultivation on solid medium using acetic acid as carbon source, (II) neutral lipid estimation by fluorimetry using the lipophilic dye Nile red.

Conclusions: Results showed that, with the proposed methodology, the oleaginous potential of yeasts with broad taxonomic diversity and variety of growth characteristics was discriminated. Furthermore, this work clearly demonstrated the association of the oleaginous yeast character to the strain level, contrarily to the species-level linkage, as usually stated.

Keywords: Intracellular lipids; Nile red; Single cell oils; Volatile fatty acids; Yeasts.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetic Acid / metabolism*
  • Culture Media
  • Fluorescent Dyes / chemistry*
  • High-Throughput Screening Assays
  • Lipid Metabolism
  • Oxazines / chemistry*
  • Soil Microbiology
  • Staining and Labeling
  • Yeasts / classification
  • Yeasts / growth & development
  • Yeasts / isolation & purification*
  • Yeasts / metabolism

Substances

  • Culture Media
  • Fluorescent Dyes
  • Oxazines
  • nile red
  • Acetic Acid