Image analysis of mechanistic protein biomarkers for the characterization of genotoxicants: Aneugens, clastogens, and reactive oxygen species inducers

Environ Mol Mutagen. 2020 Jun;61(5):534-550. doi: 10.1002/em.22374. Epub 2020 Apr 27.

Abstract

The early detection of genotoxicity contributes to cutting-edge drug discovery and development, requiring effective identification of genotoxic hazards posed by drugs while providing mode of action (MoA) information in a high throughput manner. In other words, there is a need to complement standard genotoxicity testing according to the test battery given in ICH S2(R1) with new in vitro tools, thereby contributing to a more in-depth analysis of genotoxic effects. Here, we report on a proof-of-concept MoA approach based on post-translational modifications of proteins (PTMs) indicative of clastogenic and aneugenic effects in TK6 cells using imaging technology (with automated analysis). Cells were exposed in a 96-well plate format with a panel of reference (geno)toxic compounds and subsequently analyzed at 4 and 24 hr to detect dose-dependent changes in PTMs, relevant for mechanistic analysis. All tested compounds that interfere with the spindle apparatus yielded a BubR1 (S640) (3/3) and phospho-histone H3 (S28) (7/9) positive dose-response reflecting aneugenicity, whereas compounds inducing DNA double-strand-breaks were associated with positive FANCD2 (S1404) and 53BP1 (S1778) responses pointing to clastogenicity (2/3). The biomarker p53 (K373) was able to distinguish genotoxicants from non-genotoxicants (2/4), while the induction of reactive oxygen species (ROS), potentially causing DNA damage, was associated with a positive Nrf2 (S40) response (2/2). This work demonstrates that genotoxicants and non-genotoxicants induce different biomarker responses in TK6 cells which can be used for reliable classification into MoA groups (aneugens/clastogens/non-genotoxicants/ROS inducers), supporting a more in-depth safety assessment of drug candidates.

Keywords: ROS inducers; aneugens; biomarkers; clastogens; genotoxicity; image analysis.

MeSH terms

  • Aneugens / toxicity*
  • Biomarkers / metabolism*
  • Cell Line
  • Humans
  • Image Processing, Computer-Assisted*
  • Mutagens / toxicity*
  • Phosphorylation / drug effects
  • Protein Processing, Post-Translational / drug effects
  • Proteins / metabolism*
  • Reactive Oxygen Species / metabolism*

Substances

  • Aneugens
  • Biomarkers
  • Mutagens
  • Proteins
  • Reactive Oxygen Species