German population data for 18 X-STRs: a hexaplex PCR adding two clusters of X-STRs to the Argus X-12 set and expanding the German haplotype databases

Int J Legal Med. 2020 Nov;134(6):2061-2062. doi: 10.1007/s00414-020-02306-z. Epub 2020 May 4.

Abstract

In kinship analysis, large data sets with estimated haplotype frequencies for marker clusters are very important for the likelihood calculation. Practical use of the X-STRs demonstrated that in some complex kinship cases, the marker set of the Investigator Argus X-12 kit can be insufficient. This study aimed to extend the German data base of the Argus X-12 kit (1037 haplotypes) and for a cluster in Xq21 (806 haplotypes) with additional 700 male haplotypes and to include a further cluster in Xp22.3 to complete the X-STR marker set for complex kinship cases.

Keywords: Haplotype frequencies; Kinship analysis; Linkage disequilibrium; STR markers; X chromosome.

MeSH terms

  • Chromosomes, Human, X*
  • Databases, Genetic
  • Genetic Linkage*
  • Genetics, Population
  • Germany
  • Haplotypes*
  • Humans
  • Linkage Disequilibrium*
  • Male
  • Microsatellite Repeats*
  • Polymerase Chain Reaction / methods*