The Rs12569232 SNP Association with Vogt-Koyanagi-Harada Disease and Behcet's Disease is Probably Mediated by Regulation of Linc00467 Expression

Ocul Immunol Inflamm. 2021 Nov 17;29(7-8):1464-1470. doi: 10.1080/09273948.2020.1745244. Epub 2020 May 13.

Abstract

Purpose: To investigate whether the rs12569232 SNP association with Vogt-Koyanagi-Harada disease and Behcet's disease is mediated by regulation of Linc00467 expression.Methods: The expression of linc00467 was detected by real-time PCR. Adenovirus carrying the linc00467 was transduced into CD4+T cells and the effect on cell viability was measured by the CCK-8 test. Human proteome microarray and starBase 2.0 were used to identify the binding proteins of linc00467 and RNA Immunoprecipitation (RIP) was used to confirm the identity of bound proteins.Results: The rs12569232 was associated with the expression of linc00467. The expression of linc00467 was up-regulated in PBMCs and CD4+T cells from VKH disease and BD patients. Over-expression of linc00467 increased cell viability of CD4+T cells. HUR was the common binding protein identified by the two methods and confirmed by RIP.Conclusions: The rs12569232 association with VKH disease and BD may be mediated via regulating the expression of linc00467.

Keywords: Behcet’s disease; Cd4+T cells; Vogt-Koyanagi-Harada disease; lincRNA; single nucleotide polymorphism.

MeSH terms

  • Adenoviridae / genetics
  • Adult
  • Behcet Syndrome / genetics*
  • Behcet Syndrome / immunology
  • CD4-Positive T-Lymphocytes / metabolism*
  • Cell Survival
  • Cytokines / metabolism
  • Enzyme-Linked Immunosorbent Assay
  • Female
  • Gene Expression Regulation / physiology*
  • Genetic Predisposition to Disease
  • Genotyping Techniques
  • Humans
  • In Situ Hybridization, Fluorescence
  • Male
  • Polymorphism, Single Nucleotide / genetics*
  • RNA, Long Noncoding / genetics*
  • Real-Time Polymerase Chain Reaction
  • Transfection
  • Uveomeningoencephalitic Syndrome / genetics*
  • Uveomeningoencephalitic Syndrome / immunology

Substances

  • Cytokines
  • RNA, Long Noncoding