Candidate polymorphisms and susceptibility to inflammatory bowel disease: A systematic review and meta-analysis

Gene. 2020 Aug 30:753:144814. doi: 10.1016/j.gene.2020.144814. Epub 2020 May 26.

Abstract

Aims: The goal of our study is to investigate the contribution of the 13 single-nucleotide polymorphisms to inflammatory bowel disease (IBD), including Crohn's disease (CD) and Ulcerative colitis (UC).

Methods: A total of 44 articles were retrieved from bibliographic databases including PubMed, Embase, SpingerLink, Web of Science, Chinese National Knowledge Infrastructure (CNKI), and Wanfang. Through a comprehensive filtering procedure, 13 single-nucleotide polymorphisms were collected in the meta-analysis, which was done by Review Manager 5.0.

Results: After a systematic filtration, there were 13 single-nucleotide polymorphisms (SNPs) from 44 articles involved in our meta-analysis. Our results demonstrated that 3 SNPs were found to be significantly associated with CD/UC/IBD: IRF5 rs4728142 (UC: OR = 1.21, 95% CI = 1.09-1.35, P = 0.0003; OR = 1.30, 95% CI = 1.08-1.57, P = 0.006 in Asian), PTGER4 rs4613763 (CD: the overall OR = 1.28, 95% CI = 1.01-1.64, P = 0.04; IBD: OR = 1.31, 95% CI = 1.04-1.65, P = 0.02), IL12B rs6887695 (CD: the overall OR = 1.17, 95% CI = 1.06-1.30, P = 0.002; UC: the overall OR = 1.13, 95% CI = 1.01-1.26, P = 0.03; IBD: the overall OR = 1.15, 95% CI = 1.06-1.24, P = 0.0009).

Conclusion: Our meta-analyses have indicated the significant associations between SNPs (IRF5 rs4728142, PTGER4 rs4613763, and IL12B rs6887695) and CD/UC/IBD.

Keywords: Inflammatory bowel disease; Meta-analysis; Polymorphism.

Publication types

  • Meta-Analysis
  • Systematic Review

MeSH terms

  • Asian People / genetics
  • Case-Control Studies
  • Colitis, Ulcerative / genetics
  • Crohn Disease / genetics
  • Disease Susceptibility
  • Genetic Association Studies
  • Genetic Predisposition to Disease / genetics
  • Genotype
  • Humans
  • Inflammatory Bowel Diseases / genetics*
  • Interferon Regulatory Factors / genetics*
  • Interleukin-12 Subunit p40 / genetics*
  • Phenotype
  • Polymorphism, Single Nucleotide / genetics
  • Receptors, Prostaglandin E, EP4 Subtype / genetics*
  • White People / genetics

Substances

  • IL12B protein, human
  • IRF5 protein, human
  • Interferon Regulatory Factors
  • Interleukin-12 Subunit p40
  • PTGER4 protein, human
  • Receptors, Prostaglandin E, EP4 Subtype