Withanone and Withaferin-A are predicted to interact with transmembrane protease serine 2 (TMPRSS2) and block entry of SARS-CoV-2 into cells

J Biomol Struct Dyn. 2022 Jan;40(1):1-13. doi: 10.1080/07391102.2020.1775704. Epub 2020 Jun 16.

Abstract

Coronavirus disease 2019 (COVID-19) initiated in December 2019 in Wuhan, China and became pandemic causing high fatality and disrupted normal life calling world almost to a halt. Causative agent is a novel coronavirus called Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2/2019-nCoV). While new line of drug/vaccine development has been initiated world-wide, in the current scenario of high infected numbers, severity of the disease and high morbidity, repurposing of the existing drugs is heavily explored. Here, we used a homology-based structural model of transmembrane protease serine 2 (TMPRSS2), a cell surface receptor, required for entry of virus to the target host cell. Using the strengths of molecular docking and molecular dynamics simulations, we examined the binding potential of Withaferin-A (Wi-A), Withanone (Wi-N) and caffeic acid phenethyl ester to TPMRSS2 in comparison to its known inhibitor, Camostat mesylate. We found that both Wi-A and Wi-N could bind and stably interact at the catalytic site of TMPRSS2. Wi-N showed stronger interactions with TMPRSS2 catalytic residues than Wi-A and was also able to induce changes in its allosteric site. Furthermore, we investigated the effect of Wi-N on TMPRSS2 expression in MCF7 cells and found remarkable downregulation of TMPRSS2 mRNA in treated cells predicting dual action of Wi-N to block SARS-CoV-2 entry into the host cells. Since the natural compounds are easily available/affordable, they may even offer a timely therapeutic/preventive value for the management of SARS-CoV-2 pandemic. We also report that Wi-A/Wi-N content varies in different parts of Ashwagandha and warrants careful attention for their use.Communicated by Ramaswamy H. Sarma.

Keywords: Ashwagandha; COVID-19; Withaferin-A; Withanone; binding; caffeic acid phenethyl ester; honey bee; inhibition; molecular docking; propolis; transmembrane protease serine 2 (TMPRSS2).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • COVID-19
  • Humans
  • MCF-7 Cells
  • Molecular Docking Simulation
  • Plant Extracts / chemistry
  • SARS-CoV-2*
  • Serine
  • Serine Endopeptidases / genetics
  • Serine Proteinase Inhibitors / pharmacology*
  • Vaccine Development
  • Virus Internalization / drug effects*
  • Withanolides / pharmacology*

Substances

  • Plant Extracts
  • Serine Proteinase Inhibitors
  • Withanolides
  • Serine
  • Serine Endopeptidases
  • TMPRSS2 protein, human
  • withanone
  • withaferin A
  • Ashwagandha