An allosteric modulator binds to a conformational hub in the β 2 adrenergic receptor

Nat Chem Biol. 2020 Jul;16(7):749-755. doi: 10.1038/s41589-020-0549-2. Epub 2020 Jun 1.

Abstract

Most drugs acting on G-protein-coupled receptors target the orthosteric binding pocket where the native hormone or neurotransmitter binds. There is much interest in finding allosteric ligands for these targets because they modulate physiologic signaling and promise to be more selective than orthosteric ligands. Here we describe a newly developed allosteric modulator of the β2-adrenergic receptor (β2AR), AS408, that binds to the membrane-facing surface of transmembrane segments 3 and 5, as revealed by X-ray crystallography. AS408 disrupts a water-mediated polar network involving E1223.41 and the backbone carbonyls of V2065.45 and S2075.46. The AS408 binding site is adjacent to a previously identified molecular switch for β2AR activation formed by I3.40, P5.50 and F6.44. The structure reveals how AS408 stabilizes the inactive conformation of this switch, thereby acting as a negative allosteric modulator for agonists and positive allosteric modulator for inverse agonists.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adrenergic beta-2 Receptor Agonists / chemistry*
  • Adrenergic beta-2 Receptor Agonists / pharmacology
  • Adrenergic beta-Antagonists / chemistry*
  • Adrenergic beta-Antagonists / pharmacology
  • Allosteric Regulation
  • Allosteric Site
  • Alprenolol / chemistry*
  • Alprenolol / pharmacology
  • HEK293 Cells
  • Humans
  • Kinetics
  • Ligands
  • Molecular Docking Simulation
  • Molecular Dynamics Simulation
  • Norepinephrine / chemistry*
  • Norepinephrine / pharmacology
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Protein Structure, Secondary
  • Receptors, Adrenergic, beta-2 / chemistry*
  • Receptors, Adrenergic, beta-2 / metabolism
  • Salmeterol Xinafoate / chemistry*
  • Salmeterol Xinafoate / pharmacology
  • Thermodynamics
  • Water / chemistry

Substances

  • Adrenergic beta-2 Receptor Agonists
  • Adrenergic beta-Antagonists
  • Ligands
  • Receptors, Adrenergic, beta-2
  • Water
  • Salmeterol Xinafoate
  • Alprenolol
  • Norepinephrine