Structures of human pannexin 1 reveal ion pathways and mechanism of gating

Nature. 2020 Aug;584(7822):646-651. doi: 10.1038/s41586-020-2357-y. Epub 2020 Jun 3.

Abstract

Pannexin 1 (PANX1) is an ATP-permeable channel with critical roles in a variety of physiological functions such as blood pressure regulation1, apoptotic cell clearance2 and human oocyte development3. Here we present several structures of human PANX1 in a heptameric assembly at resolutions of up to 2.8 angström, including an apo state, a caspase-7-cleaved state and a carbenoxolone-bound state. We reveal a gating mechanism that involves two ion-conducting pathways. Under normal cellular conditions, the intracellular entry of the wide main pore is physically plugged by the C-terminal tail. Small anions are conducted through narrow tunnels in the intracellular domain. These tunnels connect to the main pore and are gated by a long linker between the N-terminal helix and the first transmembrane helix. During apoptosis, the C-terminal tail is cleaved by caspase, allowing the release of ATP through the main pore. We identified a carbenoxolone-binding site embraced by W74 in the extracellular entrance and a role for carbenoxolone as a channel blocker. We identified a gap-junction-like structure using a glycosylation-deficient mutant, N255A. Our studies provide a solid foundation for understanding the molecular mechanisms underlying the channel gating and inhibition of PANX1 and related large-pore channels.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / metabolism
  • Animals
  • Apoproteins / chemistry
  • Apoproteins / metabolism
  • Apoproteins / ultrastructure
  • Apoptosis
  • Binding Sites / drug effects
  • Carbenoxolone / chemistry
  • Carbenoxolone / metabolism
  • Carbenoxolone / pharmacology
  • Caspase 7 / metabolism
  • Cell Line
  • Connexins / chemistry*
  • Connexins / metabolism*
  • Connexins / ultrastructure
  • Cryoelectron Microscopy*
  • Gap Junctions
  • Glycosylation
  • Humans
  • Ion Channel Gating* / drug effects
  • Models, Molecular
  • Mutation
  • Nerve Tissue Proteins / chemistry*
  • Nerve Tissue Proteins / metabolism*
  • Nerve Tissue Proteins / ultrastructure
  • Patch-Clamp Techniques*
  • Protein Subunits / chemistry
  • Protein Subunits / metabolism
  • Sf9 Cells

Substances

  • Apoproteins
  • Connexins
  • Nerve Tissue Proteins
  • PANX1 protein, human
  • Protein Subunits
  • Adenosine Triphosphate
  • Caspase 7
  • Carbenoxolone