Genomic profiling in renal cell carcinoma

Nat Rev Nephrol. 2020 Aug;16(8):435-451. doi: 10.1038/s41581-020-0301-x. Epub 2020 Jun 19.

Abstract

The treatment landscape of metastatic renal cell carcinoma (RCC) has been revolutionized over the past two decades, bringing forth an era in which more than a dozen therapeutic agents are now available to treat patients. As a consequence, personalized care has become a critical part of developing effective treatment guidelines and improving patient outcomes. One of the most important emerging aspects of precision medicine in cancer is matching patients and treatments based on the genomic characteristics of an individual and their tumour. Despite the lack of a single genomic predictor of treatment response or prognostication feature in RCC, emerging research suggests that the identification of such markers remains promising. Mutations in VHL and alterations in its downstream pathways are the mainstay of RCC development and progression. However, the predictive value of VHL mutations has been questioned. Further research has examined mutations in genes involved in chromosome remodelling (for example, PBRM1, BAP1 and SETD2), DNA methylation and DNA damage repair, all of which have been associated with clinical outcomes. Here, we provide a comprehensive overview of genomic evidence in the context of RCC and its potential predictive and prognostic value.

Publication types

  • Review

MeSH terms

  • Angiogenesis Inhibitors / therapeutic use
  • Antineoplastic Agents / therapeutic use*
  • Antineoplastic Agents, Immunological / therapeutic use
  • Carcinoma, Renal Cell / drug therapy
  • Carcinoma, Renal Cell / genetics*
  • Carcinoma, Renal Cell / pathology
  • DNA Methylation / genetics
  • DNA Repair / genetics
  • DNA-Binding Proteins / genetics
  • Enhancer of Zeste Homolog 2 Protein / genetics
  • Genomics*
  • Histone-Lysine N-Methyltransferase / genetics
  • Humans
  • Kidney Neoplasms / drug therapy
  • Kidney Neoplasms / genetics*
  • Kidney Neoplasms / pathology
  • Molecular Targeted Therapy
  • Neurofibromin 2 / genetics
  • PTEN Phosphohydrolase / genetics
  • Precision Medicine
  • Prognosis
  • Protein Kinase Inhibitors / therapeutic use
  • Proto-Oncogene Proteins c-met / genetics
  • Telomerase / genetics
  • Transcription Factors / genetics
  • Transcriptome
  • Tumor Suppressor Protein p53 / genetics
  • Tumor Suppressor Proteins / genetics
  • Ubiquitin Thiolesterase / genetics
  • Von Hippel-Lindau Tumor Suppressor Protein / genetics

Substances

  • Angiogenesis Inhibitors
  • Antineoplastic Agents
  • Antineoplastic Agents, Immunological
  • BAP1 protein, human
  • DNA-Binding Proteins
  • NF2 protein, human
  • Neurofibromin 2
  • PBRM1 protein, human
  • Protein Kinase Inhibitors
  • TP53 protein, human
  • Transcription Factors
  • Tumor Suppressor Protein p53
  • Tumor Suppressor Proteins
  • EZH2 protein, human
  • Enhancer of Zeste Homolog 2 Protein
  • Histone-Lysine N-Methyltransferase
  • SETD2 protein, human
  • Von Hippel-Lindau Tumor Suppressor Protein
  • MET protein, human
  • Proto-Oncogene Proteins c-met
  • TERT protein, human
  • Telomerase
  • PTEN Phosphohydrolase
  • PTEN protein, human
  • Ubiquitin Thiolesterase
  • VHL protein, human