Genomics, transcriptomics, proteomics and big data analysis in the discovery of new diagnostic markers and targets for therapy development

Prog Mol Biol Transl Sci. 2020:173:61-90. doi: 10.1016/bs.pmbts.2020.04.017. Epub 2020 May 13.

Abstract

Highly complex endophenotypes and underlying molecular mechanisms have prevented effective diagnosis and treatment of autism spectrum disorder. Despite extensive studies to identify relevant biosignatures, no biomarker and therapeutic targets are available in the current clinical practice. While our current knowledge is still largely incomplete, -omics technology and machine learning-based big data analysis have provided novel insights on the etiology of autism spectrum disorders, elucidating systemic impairments that can be translated into biomarker and therapy target candidates. However, more integrated and sophisticated approaches are vital to realize molecular stratification and individualized treatment strategy. Ultimately, systemic approaches based on -omics and big data analysis will significantly contribute to more effective biomarker and therapy development for autism spectrum disorder.

Keywords: Autism spectrum disorder; Big data analysis; Genomics; Machine learning; Proteomics; Transcriptomics.

Publication types

  • Review

MeSH terms

  • Autism Spectrum Disorder / diagnosis*
  • Autism Spectrum Disorder / therapy*
  • Biomarkers / metabolism*
  • Data Analysis*
  • Genomics*
  • Humans
  • Molecular Targeted Therapy
  • Proteomics*
  • Transcriptome / genetics*

Substances

  • Biomarkers