Synergistic role of nucleotides and lipids for the self-assembly of Shs1 septin oligomers

Biochem J. 2020 Jul 31;477(14):2697-2714. doi: 10.1042/BCJ20200199.

Abstract

Budding yeast septins are essential for cell division and polarity. Septins assemble as palindromic linear octameric complexes. The function and ultra-structural organization of septins are finely governed by their molecular polymorphism. In particular, in budding yeast, the end subunit can stand either as Shs1 or Cdc11. We have dissected, here, for the first time, the behavior of the Shs1 protomer bound to membranes at nanometer resolution, in complex with the other septins. Using electron microscopy, we have shown that on membranes, Shs1 protomers self-assemble into rings, bundles, filaments or two-dimensional gauzes. Using a set of specific mutants we have demonstrated a synergistic role of both nucleotides and lipids for the organization and oligomerization of budding yeast septins. Besides, cryo-electron tomography assays show that vesicles are deformed by the interaction between Shs1 oligomers and lipids. The Shs1-Shs1 interface is stabilized by the presence of phosphoinositides, allowing the visualization of micrometric long filaments formed by Shs1 protomers. In addition, molecular modeling experiments have revealed a potential molecular mechanism regarding the selectivity of septin subunits for phosphoinositide lipids.

Keywords: cryo-electron microscopy; membranes; nucleotide; septin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Cell Cycle Proteins / chemistry*
  • Cell Cycle Proteins / genetics
  • Cell Cycle Proteins / metabolism*
  • Cryoelectron Microscopy
  • Cytoskeletal Proteins / chemistry
  • Cytoskeletal Proteins / genetics
  • Cytoskeletal Proteins / metabolism
  • GTP Phosphohydrolases / chemistry
  • GTP Phosphohydrolases / metabolism
  • Guanosine Diphosphate / chemistry
  • Guanosine Diphosphate / metabolism
  • Guanosine Triphosphate / chemistry
  • Guanosine Triphosphate / metabolism*
  • Lipids / chemistry*
  • Liposomes / chemistry
  • Liposomes / metabolism
  • Membrane Proteins / chemistry
  • Membrane Proteins / metabolism
  • Mutation
  • Phosphatidylinositol 4,5-Diphosphate / metabolism*
  • Protein Multimerization
  • Protein Subunits / chemistry
  • Protein Subunits / metabolism
  • Saccharomyces cerevisiae Proteins / chemistry*
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Tomography / methods

Substances

  • CDC11 protein, S cerevisiae
  • Cell Cycle Proteins
  • Cytoskeletal Proteins
  • Lipids
  • Liposomes
  • Membrane Proteins
  • Phosphatidylinositol 4,5-Diphosphate
  • Protein Subunits
  • SHS1 protein, S cerevisiae
  • Saccharomyces cerevisiae Proteins
  • Guanosine Diphosphate
  • Guanosine Triphosphate
  • CDC10 protein, S cerevisiae
  • GTP Phosphohydrolases