Phylogenetic and antigenic analysis of bovine parainfluenza virus type 3 isolated in Japan between 2002 and 2019

Vet Microbiol. 2020 Aug:247:108774. doi: 10.1016/j.vetmic.2020.108774. Epub 2020 Jun 21.

Abstract

Bovine parainfluenza virus type 3 (BPIV3) is one of the most important viral respiratory pathogens of cattle. In addition to the classical BPIV3 genotype A (BPIV3a), new genetic groups, genotype B (BPIV3b) and C (BPIV3c), have been identified and isolated in certain parts of the world. The present study aimed to investigate the genetic and antigenic characteristics of BPIV3 circulating in Japan. Seventy-three BPIV3 field strains were isolated from nasal samples of cattle between 2002 and 2019. Phylogenetic analysis of the phosphoprotein and hemagglutinin-neuraminidase genes showed that the isolates clustered into two genotypes, BPIV3a (49 %) and BPIV3c (51 %). The BPIV3a strains had more wide genetic variation than the rest of the genotypes. Additionally, new variants were obtained and designated them tentatively as subgroup 4 of the BPIV3a. The first Japanese BPIV3c was isolated in 2012, but here the BPIV3c NM2 strain was isolated from a sample collected four years earlier than the previous report. The antigenicity of ten BPIV3 strains including all three genotypes was assessed with a viral cross-neutralization test. Anti-sera against BPIV3a and BPIV3b cross-reacted well with both homologous and heterologous viruses. On the other hand, anti-sera against BPIV3c had reduced cross-reactivity to the heterologous viruses. Overall, our findings showed that genetically and antigenically divergent BPIV3 is prevalent in cattle in Japan. These results could provide a reference for molecular epidemiological characterization of BPIV3 and vaccine development.

Keywords: Bovine parainfluenza virus type 3; Field strains; Genotype C; Phylogenetic analysis; Serological analysis; Subgroup 4.

MeSH terms

  • Animals
  • Antigens, Viral / genetics*
  • Cattle / virology
  • Cattle Diseases / epidemiology
  • Cattle Diseases / virology
  • Dairying
  • Female
  • Genotype
  • Japan / epidemiology
  • Male
  • Nose / virology
  • Parainfluenza Virus 3, Bovine / classification*
  • Parainfluenza Virus 3, Bovine / immunology*
  • Phylogeny*
  • Prevalence
  • Respirovirus Infections / epidemiology*
  • Respirovirus Infections / veterinary*

Substances

  • Antigens, Viral