Fecal viral shedding in COVID-19 patients: Clinical significance, viral load dynamics and survival analysis

Virus Res. 2020 Nov:289:198147. doi: 10.1016/j.virusres.2020.198147. Epub 2020 Aug 28.

Abstract

Background: To investigate the clinical significance, viral shedding duration and viral load dynamics of positive fecal SARS-CoV-2 signals in COVID-19.

Methods: COVID-19 patients were included. SARS-CoV-2 RNA was tested in stool and respiratory specimens until two sequential negative results were obtained. Clinical, laboratory and imaging data were recorded.

Results: Of the 69 COVID-19 patients, 20 (28.99 %) had positive fecal viral tests who were younger, had lower C-reactive protein (CRP) and fibrinogen (FIB) levels on admission (all P < 0.05), and showed more improvement and less progression on chest CT during recovery. The median duration of positive viral signals was significantly longer in stool samples than in respiratory samples (P < 0.05). In spite of the negative oropharyngeal swabs, eleven patients were tested positive for viral RNA in stool specimens, with their fecal SARS-CoV-2 RNA Ct (cycle threshold) values reaching 25-27. 6 of these 11 patients' Ct values rebounded.

Conclusion: SARS-CoV-2 RNA in stool specimens was associated with a milder condition and better recovery of chest CT results while the median duration of SARS-CoV-2 RNA persistence was significantly longer in fecal samples than in oropharyngeal swabs. The fecal viral load easily reached a high level and rebounded even though respiratory signals became negative.

Keywords: COVID-19; Fecal specimens; Survival analysis; Viral load.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Betacoronavirus / isolation & purification*
  • C-Reactive Protein / analysis
  • COVID-19
  • Coronavirus Infections / blood
  • Coronavirus Infections / diagnostic imaging
  • Coronavirus Infections / transmission
  • Coronavirus Infections / virology*
  • Diarrhea / etiology
  • Diarrhea / virology
  • False Negative Reactions
  • Feces / virology*
  • Female
  • Fibrinogen / analysis
  • Humans
  • Lung / diagnostic imaging
  • Male
  • Middle Aged
  • Oropharynx / virology
  • Pandemics
  • Pneumonia, Viral / blood
  • Pneumonia, Viral / diagnostic imaging
  • Pneumonia, Viral / transmission
  • Pneumonia, Viral / virology*
  • Prognosis
  • RNA Stability
  • RNA, Viral / analysis*
  • Real-Time Polymerase Chain Reaction
  • SARS-CoV-2
  • Symptom Assessment
  • Viral Load
  • Virus Shedding*

Substances

  • RNA, Viral
  • Fibrinogen
  • C-Reactive Protein