Measurement of SARS-CoV-2 RNA in wastewater tracks community infection dynamics

Nat Biotechnol. 2020 Oct;38(10):1164-1167. doi: 10.1038/s41587-020-0684-z. Epub 2020 Sep 18.

Abstract

We measured severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA concentrations in primary sewage sludge in the New Haven, Connecticut, USA, metropolitan area during the Coronavirus Disease 2019 (COVID-19) outbreak in Spring 2020. SARS-CoV-2 RNA was detected throughout the more than 10-week study and, when adjusted for time lags, tracked the rise and fall of cases seen in SARS-CoV-2 clinical test results and local COVID-19 hospital admissions. Relative to these indicators, SARS-CoV-2 RNA concentrations in sludge were 0-2 d ahead of SARS-CoV-2 positive test results by date of specimen collection, 0-2 d ahead of the percentage of positive tests by date of specimen collection, 1-4 d ahead of local hospital admissions and 6-8 d ahead of SARS-CoV-2 positive test results by reporting date. Our data show the utility of viral RNA monitoring in municipal wastewater for SARS-CoV-2 infection surveillance at a population-wide level. In communities facing a delay between specimen collection and the reporting of test results, immediate wastewater results can provide considerable advance notice of infection dynamics.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Betacoronavirus / genetics
  • Betacoronavirus / isolation & purification*
  • Biotechnology
  • COVID-19
  • Connecticut / epidemiology
  • Coronavirus Infections / epidemiology*
  • Humans
  • Pandemics*
  • Pneumonia, Viral / epidemiology*
  • Prevalence
  • RNA, Viral / analysis*
  • RNA, Viral / genetics
  • SARS-CoV-2
  • Sewage / virology
  • Time Factors
  • Wastewater / virology*
  • Wastewater-Based Epidemiological Monitoring*

Substances

  • RNA, Viral
  • Sewage
  • Waste Water