Bacnet: a user-friendly platform for building multi-omics websites

Bioinformatics. 2021 Jun 9;37(9):1335-1336. doi: 10.1093/bioinformatics/btaa828.

Abstract

Summary: To face up to the exponential growth of heterogeneous datasets of various organisms, we developed a user-friendly platform for building multi-omics websites, which is named Bacnet. This platform helps bioinformaticians to construct four key web interfaces: (i) an interactive genome viewer; (ii) an expression and protein atlas; (iii) an interface for analysis of co-expression network; (iv) an interface for exploring homolog presence. We believe our platform will help the bioinformaticians to construct personalized user interfaces dedicated to biologists studying non-reference organisms.

Availability and implementation: https://github.com/becavin-lab/bacnet; Java; Eclipse RAP; Eclipse RCP.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computational Biology*
  • Proteins
  • Software*

Substances

  • Proteins